diff options
| author | Eduardo Pedroni <ep625@york.ac.uk> | 2014-05-06 14:29:37 +0100 |
|---|---|---|
| committer | Eduardo Pedroni <ep625@york.ac.uk> | 2014-05-06 14:29:37 +0100 |
| commit | 8189116ea4b5db4675e31dfd04a5687d55e29262 (patch) | |
| tree | c1815021452a888f8838f1628d8fb4689777e73e /doc/jcgp/backend/parsers | |
| parent | aa9e74e7f67789f6353fc26e02ee8e68e40609a2 (diff) | |
Added javadocs, made minor changes to the comments
Diffstat (limited to 'doc/jcgp/backend/parsers')
| -rw-r--r-- | doc/jcgp/backend/parsers/ChromosomeParser.html | 324 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/FunctionParser.html | 301 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/ParameterParser.html | 294 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/TestCaseParser.html | 296 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/class-use/ChromosomeParser.html | 124 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/class-use/FunctionParser.html | 124 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/class-use/ParameterParser.html | 124 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/class-use/TestCaseParser.html | 124 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/package-frame.html | 23 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/package-summary.html | 166 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/package-tree.html | 140 | ||||
| -rw-r--r-- | doc/jcgp/backend/parsers/package-use.html | 124 |
12 files changed, 2164 insertions, 0 deletions
diff --git a/doc/jcgp/backend/parsers/ChromosomeParser.html b/doc/jcgp/backend/parsers/ChromosomeParser.html new file mode 100644 index 0000000..14862f6 --- /dev/null +++ b/doc/jcgp/backend/parsers/ChromosomeParser.html @@ -0,0 +1,324 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 --> +<title>ChromosomeParser</title> +<meta name="date" content="2014-05-06"> +<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> +<script type="text/javascript" src="../../../script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == -1) { + parent.document.title="ChromosomeParser"; + } + } + catch(err) { + } +//--> +var methods = {"i0":9,"i1":9}; +var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/ChromosomeParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev Class</li> +<li><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/parsers/ChromosomeParser.html" target="_top">Frames</a></li> +<li><a href="ChromosomeParser.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">jcgp.backend.parsers</div> +<h2 title="Class ChromosomeParser" class="title">Class ChromosomeParser</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li>java.lang.Object</li> +<li> +<ul class="inheritance"> +<li>jcgp.backend.parsers.ChromosomeParser</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<hr> +<br> +<pre>public abstract class <span class="typeNameLabel">ChromosomeParser</span> +extends java.lang.Object</pre> +<div class="block">This class contains a method for parsing .chr files and another + for writing .chr files from given chromosomes.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Eduardo Pedroni</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#ChromosomeParser--">ChromosomeParser</a></span>()</code> </td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code>static void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#parse-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">parse</a></span>(java.io.File file, + <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</code> +<div class="block">Use this method to parse .chr files into a given chromosome.</div> +</td> +</tr> +<tr id="i1" class="rowColor"> +<td class="colFirst"><code>static void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File file, + <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</code> +<div class="block">Writes a chromosome into the specified .chr file.</div> +</td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.Object</h3> +<code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="ChromosomeParser--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>ChromosomeParser</h4> +<pre>public ChromosomeParser()</pre> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="parse-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>parse</h4> +<pre>public static void parse(java.io.File file, + <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</pre> +<div class="block">Use this method to parse .chr files into a given chromosome. + <br><br> + This is not fully defensive as it doesn't check for number of inputs, + doesn't compare rows and columns individually and doesn't account for levels back. It + is not viable to implement these defensive measures with the chromosome format used + by CGP.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>file</code> - the .chr file to parse from</dd> +<dd><code>chromosome</code> - the chromosome to configure</dd> +<dd><code>resources</code> - the experiment resources</dd> +</dl> +</li> +</ul> +<a name="save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>save</h4> +<pre>public static void save(java.io.File file, + <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</pre> +<div class="block">Writes a chromosome into the specified .chr file. + <br><br> + The file is written in the standard .chr format and can + be read by the original CGP implementation.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>file</code> - the file to write to</dd> +<dd><code>chromosome</code> - the chromosome to save</dd> +<dd><code>resources</code> - a reference to the experiment's resources.</dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/ChromosomeParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev Class</li> +<li><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/parsers/ChromosomeParser.html" target="_top">Frames</a></li> +<li><a href="ChromosomeParser.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_bottom"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_bottom"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.bottom"> +<!-- --> +</a></div> +<!-- ======== END OF BOTTOM NAVBAR ======= --> +</body> +</html> diff --git a/doc/jcgp/backend/parsers/FunctionParser.html b/doc/jcgp/backend/parsers/FunctionParser.html new file mode 100644 index 0000000..f7ef21c --- /dev/null +++ b/doc/jcgp/backend/parsers/FunctionParser.html @@ -0,0 +1,301 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 --> +<title>FunctionParser</title> +<meta name="date" content="2014-05-06"> +<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> +<script type="text/javascript" src="../../../script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == -1) { + parent.document.title="FunctionParser"; + } + } + catch(err) { + } +//--> +var methods = {"i0":9}; +var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/FunctionParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Prev Class</span></a></li> +<li><a href="../../../jcgp/backend/parsers/ParameterParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/parsers/FunctionParser.html" target="_top">Frames</a></li> +<li><a href="FunctionParser.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">jcgp.backend.parsers</div> +<h2 title="Class FunctionParser" class="title">Class FunctionParser</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li>java.lang.Object</li> +<li> +<ul class="inheritance"> +<li>jcgp.backend.parsers.FunctionParser</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<hr> +<br> +<pre>public abstract class <span class="typeNameLabel">FunctionParser</span> +extends java.lang.Object</pre> +<div class="block">Contains a static method for parsing functions from a + .par file.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Eduardo Pedroni</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/FunctionParser.html#FunctionParser--">FunctionParser</a></span>()</code> </td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code>static void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/FunctionParser.html#parse-java.io.File-jcgp.backend.function.FunctionSet-jcgp.backend.resources.Resources-">parse</a></span>(java.io.File file, + <a href="../../../jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function">FunctionSet</a> functionSet, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</code> +<div class="block">Reads the specified file and attempts to enable + and disable the functions in the FunctionSet + accordingly.</div> +</td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.Object</h3> +<code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="FunctionParser--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>FunctionParser</h4> +<pre>public FunctionParser()</pre> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="parse-java.io.File-jcgp.backend.function.FunctionSet-jcgp.backend.resources.Resources-"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>parse</h4> +<pre>public static void parse(java.io.File file, + <a href="../../../jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function">FunctionSet</a> functionSet, + <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</pre> +<div class="block">Reads the specified file and attempts to enable + and disable the functions in the FunctionSet + accordingly. + <br><br> + Standard CGP .par files do not contain enough information + to determine if they match the currently selected function set. + For this reason, the parser assumes the function set is correct + and treats functions by their index rather than their name. Any + index outside the bounds of the function set is ignored and a + warning message is printed once parsing is complete.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>file</code> - the .par file to parse.</dd> +<dd><code>functionSet</code> - the function set whose functions should be modified.</dd> +<dd><code>resources</code> - used for printing console messages.</dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a 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HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 --> +<title>ParameterParser</title> +<meta name="date" content="2014-05-06"> +<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> +<script type="text/javascript" src="../../../script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == -1) { + parent.document.title="ParameterParser"; + } + } + catch(err) { + } +//--> +var methods = {"i0":9}; +var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/ParameterParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Prev Class</span></a></li> +<li><a 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| </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">jcgp.backend.parsers</div> +<h2 title="Class ParameterParser" class="title">Class ParameterParser</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li>java.lang.Object</li> +<li> +<ul class="inheritance"> +<li>jcgp.backend.parsers.ParameterParser</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<hr> +<br> +<pre>public abstract class <span class="typeNameLabel">ParameterParser</span> +extends java.lang.Object</pre> +<div class="block">Contains a static method for parsing parameters from a + .par file.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Eduardo Pedroni</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ParameterParser.html#ParameterParser--">ParameterParser</a></span>()</code> </td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code>static void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ParameterParser.html#parse-java.io.File-jcgp.backend.resources.ModifiableResources-">parse</a></span>(java.io.File file, + <a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a> resources)</code> +<div class="block">Parses the parameters from a specified CGP parameter file and + modifies the experiment resources appropriately.</div> +</td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.Object</h3> +<code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="ParameterParser--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>ParameterParser</h4> +<pre>public ParameterParser()</pre> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="parse-java.io.File-jcgp.backend.resources.ModifiableResources-"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>parse</h4> +<pre>public static void parse(java.io.File file, + <a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a> resources)</pre> +<div class="block">Parses the parameters from a specified CGP parameter file and + modifies the experiment resources appropriately. + <br><br> + CGP .par files do not follow a very strict convention, so this + parser does its best to cope with format irregularities. Parsing + works even if the parameters are in the wrong order, and unknown + parameters are simply ignored.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>file</code> - the .par file to parse.</dd> +<dd><code>resources</code> - a reference to the resources object that must be modified.</dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/ParameterParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Prev Class</span></a></li> +<li><a href="../../../jcgp/backend/parsers/TestCaseParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/parsers/ParameterParser.html" target="_top">Frames</a></li> +<li><a href="ParameterParser.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_bottom"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_bottom"); 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+ } + } + catch(err) { + } +//--> +var methods = {"i0":9}; +var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/TestCaseParser.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/parsers/ParameterParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Prev Class</span></a></li> +<li>Next Class</li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/parsers/TestCaseParser.html" target="_top">Frames</a></li> +<li><a href="TestCaseParser.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">jcgp.backend.parsers</div> +<h2 title="Class TestCaseParser" class="title">Class TestCaseParser</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li>java.lang.Object</li> +<li> +<ul class="inheritance"> +<li>jcgp.backend.parsers.TestCaseParser</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<hr> +<br> +<pre>public abstract class <span class="typeNameLabel">TestCaseParser</span> +extends java.lang.Object</pre> +<div class="block">Contains a static method for parsing values from a + CGP problem data file. The actual file extension + varies from problem to problem, and is therefore + defined in the experiment's Problem instance.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Eduardo Pedroni</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/TestCaseParser.html#TestCaseParser--">TestCaseParser</a></span>()</code> </td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code>static void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/TestCaseParser.html#parse-java.io.File-jcgp.backend.modules.problem.TestCaseProblem-jcgp.backend.resources.ModifiableResources-">parse</a></span>(java.io.File file, + <a href="../../../jcgp/backend/modules/problem/TestCaseProblem.html" title="class in jcgp.backend.modules.problem">TestCaseProblem</a><?> problem, + <a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a> resources)</code> +<div class="block">Sets the number of inputs and outputs in the resources + to match the given file, and parses each test case + from the file into the specified problem.</div> +</td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.Object</h3> +<code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="TestCaseParser--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>TestCaseParser</h4> +<pre>public TestCaseParser()</pre> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="parse-java.io.File-jcgp.backend.modules.problem.TestCaseProblem-jcgp.backend.resources.ModifiableResources-"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>parse</h4> +<pre>public static void parse(java.io.File file, + <a href="../../../jcgp/backend/modules/problem/TestCaseProblem.html" title="class in jcgp.backend.modules.problem">TestCaseProblem</a><?> problem, + <a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a> resources)</pre> +<div class="block">Sets the number of inputs and outputs in the resources + to match the given file, and parses each test case + from the file into the specified problem.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>file</code> - the problem file to parse.</dd> +<dd><code>problem</code> - the problem into which to parse the problem data.</dd> +<dd><code>resources</code> - a modifiable reference to the experiment's resources</dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> 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Summary</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colFirst" scope="col">Class</th> +<th class="colLast" scope="col">Description</th> +</tr> +<tbody> +<tr class="altColor"> +<td class="colFirst"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers">ChromosomeParser</a></td> +<td class="colLast"> +<div class="block">This class contains a method for parsing .chr files and another + for writing .chr files from given chromosomes.</div> +</td> +</tr> +<tr class="rowColor"> +<td class="colFirst"><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers">FunctionParser</a></td> +<td class="colLast"> +<div class="block">Contains a static method for parsing functions from a + .par file.</div> +</td> +</tr> +<tr class="altColor"> +<td class="colFirst"><a href="../../../jcgp/backend/parsers/ParameterParser.html" title="class in jcgp.backend.parsers">ParameterParser</a></td> +<td class="colLast"> +<div class="block">Contains a static method for parsing parameters from a + .par file.</div> +</td> +</tr> +<tr class="rowColor"> +<td class="colFirst"><a href="../../../jcgp/backend/parsers/TestCaseParser.html" title="class in jcgp.backend.parsers">TestCaseParser</a></td> +<td class="colLast"> +<div class="block">Contains a static method for parsing values from a + CGP problem data file.</div> +</td> +</tr> +</tbody> +</table> +</li> +</ul> +</div> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li class="navBarCell1Rev">Package</li> +<li>Class</li> +<li><a href="package-use.html">Use</a></li> +<li><a 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+ allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<a name="skip.navbar.bottom"> +<!-- --> +</a></div> +<!-- ======== END OF BOTTOM NAVBAR ======= --> +</body> +</html> diff --git a/doc/jcgp/backend/parsers/package-tree.html b/doc/jcgp/backend/parsers/package-tree.html new file mode 100644 index 0000000..0f41a20 --- /dev/null +++ b/doc/jcgp/backend/parsers/package-tree.html @@ -0,0 +1,140 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 --> +<title>jcgp.backend.parsers Class Hierarchy</title> +<meta name="date" content="2014-05-06"> +<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> +<script type="text/javascript" src="../../../script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == 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Hierarchies:</span> +<ul class="horizontal"> +<li><a href="../../../overview-tree.html">All Packages</a></li> +</ul> +</div> +<div class="contentContainer"> +<h2 title="Class Hierarchy">Class Hierarchy</h2> +<ul> +<li type="circle">java.lang.Object +<ul> +<li type="circle">jcgp.backend.parsers.<a href="../../../jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">ChromosomeParser</span></a></li> +<li type="circle">jcgp.backend.parsers.<a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">FunctionParser</span></a></li> +<li type="circle">jcgp.backend.parsers.<a href="../../../jcgp/backend/parsers/ParameterParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">ParameterParser</span></a></li> +<li type="circle">jcgp.backend.parsers.<a href="../../../jcgp/backend/parsers/TestCaseParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">TestCaseParser</span></a></li> +</ul> +</li> +</ul> +</div> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li>Class</li> +<li>Use</li> +<li class="navBarCell1Rev">Tree</li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/parameters/monitors/package-tree.html">Prev</a></li> +<li><a href="../../../jcgp/backend/population/package-tree.html">Next</a></li> +</ul> 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