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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
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<h2 class="title">S</h2>
<dl>
<dt><span class="memberNameLink"><a href="../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save(File, Chromosome, Resources)</a></span> - Static method in class jcgp.backend.parsers.<a href="../jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers">ChromosomeParser</a></dt>
<dd>
<div class="block">Writes a chromosome into the specified .chr file.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#saveChromosome-java.io.File-int-">saveChromosome(File, int)</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd>
<div class="block">Saves a copy of the specified chromosome
into the given file.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledAddition.html#ScaledAddition--">ScaledAddition()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledAddition.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.ScaledAddition</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledExponential.html#ScaledExponential--">ScaledExponential()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledExponential.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.ScaledExponential</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledHypotenuse.html#ScaledHypotenuse--">ScaledHypotenuse()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.ScaledHypotenuse.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.ScaledHypotenuse</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/Resources.html#seed--">seed()</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/parameters/Parameter.html#set-T-">set(T)</a></span> - Method in class jcgp.backend.parameters.<a href="../jcgp/backend/parameters/Parameter.html" title="class in jcgp.backend.parameters">Parameter</a></dt>
<dd>
<div class="block">Sets the parameter to the specified value, if the property
is not bound.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setArity-int-">setArity(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd>
<div class="block">This is called automatically by the experiment when the arity changes.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#setChangingConnection-jcgp.backend.population.Connection-">setChangingConnection(Connection)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIInput.html#setChangingConnection-jcgp.backend.population.Connection-">setChangingConnection(Connection)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setChangingConnection-jcgp.backend.population.Connection-">setChangingConnection(Connection)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIOutput.html#setChangingConnection-jcgp.backend.population.Connection-">setChangingConnection(Connection)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setColumns-int-">setColumns(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Mutable.html#setConnection-int-jcgp.backend.population.Connection-">setConnection(int, Connection)</a></span> - Method in interface jcgp.backend.population.<a href="../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></dt>
<dd>
<div class="block">This method sets the indexed connection to the specified new connection.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Node.html#setConnection-int-jcgp.backend.population.Connection-">setConnection(int, Connection)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Output.html#setConnection-int-jcgp.backend.population.Connection-">setConnection(int, Connection)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Output.html" title="class in jcgp.backend.population">Output</a></dt>
<dd>
<div class="block">When mutating an output, the index parameter
is simply ignored and the output source is
set.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine(GUIGene)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIInput.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine(GUIGene)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine(GUIGene)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIOutput.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine(GUIGene)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#setConnections-jcgp.gui.population.GUIGene.GUIGeneState-">setConnections(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIInput.html#setConnections-jcgp.gui.population.GUIGene.GUIGeneState-">setConnections(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></dt>
<dd>
<div class="block">Set all connections to a given state.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setConnections-jcgp.gui.population.GUIGene.GUIGeneState-">setConnections(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIOutput.html#setConnections-jcgp.gui.population.GUIGene.GUIGeneState-">setConnections(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setConsole-jcgp.backend.resources.Console-">setConsole(Console)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd>
<div class="block">This can be set to null if no extra console is desired.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#setConsole-jcgp.backend.resources.Console-">setConsole(Console)</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd>
<div class="block">Sets an extra console.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setCurrentGeneration-int-">setCurrentGeneration(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setCurrentRun-int-">setCurrentRun(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/parameters/ParameterStatus.html#setDetails-java.lang.String-">setDetails(String)</a></span> - Method in enum jcgp.backend.parameters.<a href="../jcgp/backend/parameters/ParameterStatus.html" title="enum in jcgp.backend.parameters">ParameterStatus</a></dt>
<dd>
<div class="block">Sets a new string containing details about the current status.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#setEvaluating-boolean-">setEvaluating(boolean)</a></span> - Method in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/PopulationPane.html#setEvaluating-boolean-">setEvaluating(boolean)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population">PopulationPane</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#setEvolutionaryStrategy-int-">setEvolutionaryStrategy(int)</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Chromosome.html#setFitness-double-">setFitness(double)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a></dt>
<dd>
<div class="block">Sets the fitness of the chromosome.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setFitnessOrientation-jcgp.backend.modules.problem.BestFitness-">setFitnessOrientation(BestFitness)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Node.html#setFunction-jcgp.backend.function.Function-">setFunction(Function)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a></dt>
<dd>
<div class="block">Sets the node function.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setFunction-jcgp.backend.function.Function-">setFunction(Function)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setFunctionSet-jcgp.backend.function.FunctionSet-">setFunctionSet(FunctionSet)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd>
<div class="block">Update the current function set.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setGenerations-int-">setGenerations(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Chromosome.html#setInputs-java.lang.Object...-">setInputs(Object...)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a></dt>
<dd>
<div class="block">Loops through the inputs and sets the specified values,
so that evaluations can be performed.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setInputs-int-">setInputs(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/ChromosomePane.html#setInputs-java.lang.Object:A-">setInputs(Object[])</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setLevelsBack-int-">setLevelsBack(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#setMutator-int-">setMutator(int)</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setNode-jcgp.backend.population.Node-">setNode(Node)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIOutput.html#setOutput-jcgp.backend.population.Output-">setOutput(Output)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setOutputs-int-">setOutputs(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setPopulationSize-int-">setPopulationSize(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#setProblem-int-">setProblem(int)</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setReportInterval-int-">setReportInterval(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setRows-int-">setRows(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setRuns-int-">setRuns(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/ModifiableResources.html#setSeed-int-">setSeed(int)</a></span> - Method in class jcgp.backend.resources.<a href="../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIInput.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUINode.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIOutput.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState(GUIGene.GUIGeneState)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#SETTINGS_MIN_WIDTH">SETTINGS_MIN_WIDTH</a></span> - Static variable in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd> </dd>
<dt><a href="../jcgp/gui/settings/SettingsPane.html" title="class in jcgp.gui.settings"><span class="typeNameLink">SettingsPane</span></a> - Class in <a href="../jcgp/gui/settings/package-summary.html">jcgp.gui.settings</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/settings/SettingsPane.html#SettingsPane-jcgp.gui.GUI-">SettingsPane(GUI)</a></span> - Constructor for class jcgp.gui.settings.<a href="../jcgp/gui/settings/SettingsPane.html" title="class in jcgp.gui.settings">SettingsPane</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Input.html#setValue-java.lang.Object-">setValue(Object)</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Input.html" title="class in jcgp.backend.population">Input</a></dt>
<dd>
<div class="block">Sets this input's value.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIInput.html#setValue-java.lang.Object-">setValue(Object)</a></span> - Method in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Sine.html#Sine--">Sine()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.Sine.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions.Sine</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.SineAB.html#SineAB--">SineAB()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.SineAB.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions.SineAB</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#SOCKET_RADIUS">SOCKET_RADIUS</a></span> - Static variable in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#SOFT_HIGHLIGHT_COLOUR">SOFT_HIGHLIGHT_COLOUR</a></span> - Static variable in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Population.html#sort--">sort()</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a></dt>
<dd>
<div class="block">Sorts the population in ascending order of fitness quality.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/population/GUIGene.html#SPACING">SPACING</a></span> - Static variable in class jcgp.gui.population.<a href="../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.Square.html#Square--">Square()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.Square.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.Square</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html#SquaredMultiplication--">SquaredMultiplication()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.SquaredMultiplication</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.SquareRoot.html#SquareRoot--">SquareRoot()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.SquareRoot.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions.SquareRoot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.SquareRoot.html#SquareRoot--">SquareRoot()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.SquareRoot.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.SquareRoot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#start-javafx.stage.Stage-">start(Stage)</a></span> - Method in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/JCGP.html#start--">start()</a></span> - Method in class jcgp.<a href="../jcgp/JCGP.html" title="class in jcgp">JCGP</a></dt>
<dd>
<div class="block">This method calls <code>nextGeneration()</code> in a loop
until the experiment is flagged as finished.</div>
</dd>
<dt><a href="../jcgp/backend/statistics/StatisticsLogger.html" title="class in jcgp.backend.statistics"><span class="typeNameLink">StatisticsLogger</span></a> - Class in <a href="../jcgp/backend/statistics/package-summary.html">jcgp.backend.statistics</a></dt>
<dd>
<div class="block">This is a utility class for logging experiment statistics when doing multiple runs.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/statistics/StatisticsLogger.html#StatisticsLogger--">StatisticsLogger()</a></span> - Constructor for class jcgp.backend.statistics.<a href="../jcgp/backend/statistics/StatisticsLogger.html" title="class in jcgp.backend.statistics">StatisticsLogger</a></dt>
<dd>
<div class="block">Create a new statistics logger, use this when resetting is necessary.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#step--">step()</a></span> - Method in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Subtraction.html#Subtraction--">Subtraction()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.Subtraction.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions.Subtraction</a></dt>
<dd> </dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">This class contains all symbolic regression functions
(defined as double functions in the classic CGP implementation)
in static nested classes.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.html#SymbolicRegressionFunctions--">SymbolicRegressionFunctions()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions</a></dt>
<dd>
<div class="block">Creates a new instance of SymbolicRegressionFunctions.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Absolute.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Absolute</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Absolute returns the positive value of input 0.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Addition.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Addition</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Addition returns the sum of inputs 0 and 1.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Cosine.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Cosine</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Cosine function, in radians.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.CosineAB.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.CosineAB</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Cosine of sum.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Division.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Division</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected division, returns the quotient of input 0 (the dividend) and input 1 (the divisor).</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Exponential.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Exponential</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Exponential function.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicCosine.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.HyperbolicCosine</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Returns the hyperbolic cosine of input 0.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicSine.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.HyperbolicSine</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Returns the hyperbolic sine of input 0.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicTangent.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.HyperbolicTangent</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Returns the hyperbolic tangent of input 0.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Hypotenuse.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Hypotenuse</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Hypotenuse function.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.LogBaseTen.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.LogBaseTen</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected log base 10 function.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Multiplication.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Multiplication</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Multiplication returns the product of inputs 0 and 1.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.NaturalLog.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.NaturalLog</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected natural log function.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Power.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Power</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Power function.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Reciprocal.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Reciprocal</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected reciprocal function, returns (1 / input 0).</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Sine.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Sine</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Sine function, in radians.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.SineAB.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.SineAB</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Sine of sum.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.SquareRoot.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.SquareRoot</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected square root function, returns the square root of the absolute
value of input 0.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Subtraction.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Subtraction</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Subtraction returns the difference between inputs 0 and 1.</div>
</dd>
<dt><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Tangent.html" title="class in jcgp.backend.function"><span class="typeNameLink">SymbolicRegressionFunctions.Tangent</span></a> - Class in <a href="../jcgp/backend/function/package-summary.html">jcgp.backend.function</a></dt>
<dd>
<div class="block">Protected tangent function, in radians.</div>
</dd>
<dt><a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html" title="class in jcgp.backend.modules.problem"><span class="typeNameLink">SymbolicRegressionProblem</span></a> - Class in <a href="../jcgp/backend/modules/problem/package-summary.html">jcgp.backend.modules.problem</a></dt>
<dd>
<div class="block">Symbolic regression functions
<br><br>
Using this problem type, regression problems can be solved.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#SymbolicRegressionProblem-jcgp.backend.resources.Resources-">SymbolicRegressionProblem(Resources)</a></span> - Constructor for class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html" title="class in jcgp.backend.modules.problem">SymbolicRegressionProblem</a></dt>
<dd>
<div class="block">Creates a new instance of SymbolicRegressionProblem.</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html#SymmetricSubtraction--">SymmetricSubtraction()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html" title="class in jcgp.backend.function">TravellingSalesmanFunctions.SymmetricSubtraction</a></dt>
<dd> </dd>
</dl>
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