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-<title>Output</title>
-<meta name="date" content="2014-05-22">
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-<li><a href="package-summary.html">Package</a></li>
-<li class="navBarCell1Rev">Class</li>
-<li><a href="class-use/Output.html">Use</a></li>
-<li><a href="package-tree.html">Tree</a></li>
-<li><a href="../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../index-files/index-1.html">Index</a></li>
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-</ul>
-</div>
-<div class="subNav">
-<ul class="navList">
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-</ul>
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-<!-- ======== START OF CLASS DATA ======== -->
-<div class="header">
-<div class="subTitle">jcgp.backend.population</div>
-<h2 title="Class Output" class="title">Class Output</h2>
-</div>
-<div class="contentContainer">
-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
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-<dt>All Implemented Interfaces:</dt>
-<dd><a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></dd>
-</dl>
-<hr>
-<br>
-<pre>public class <span class="typeNameLabel">Output</span>
-extends java.lang.Object
-implements <a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></pre>
-<div class="block">This is a chromosome output. Outputs are a special
- type of mutable element with a single connection. It
- returns the value of its single connection, but it
- may not be connected to - it terminates a chromosome
- active connection path.
- <br><br>
- When mutating an output, it is easiest to use <code>mutate()</code>.
- Alternatively, you may also perform a specific mutation using
- <code>setSource(...)</code>.</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
-<dd>Eduardo Pedroni</dd>
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-</li>
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-<th class="colOne" scope="col">Constructor and Description</th>
-</tr>
-<tr class="altColor">
-<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#Output-jcgp.backend.population.Chromosome-int-">Output</a></span>(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- int&nbsp;index)</code>
-<div class="block">Makes a new instance of <code>Output</code> with the
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-<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tr id="i0" class="altColor">
-<td class="colFirst"><code>java.lang.Object</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#calculate--">calculate</a></span>()</code>&nbsp;</td>
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-<tr id="i1" class="rowColor">
-<td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></span>(<a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;m)</code>
-<div class="block">Asserts if the specified element is a copy of the elements
- this is called on.<br>
- This method returns true if and only if:
-
- the elements being compared are not the same instance;
- the connections of the compared elements are not the same instance;
- the elements have the same function (in the case of Node);
- the grid position of the elements themselves are the same;
- the grid position of all equivalent connections are the same;
-
- <br><br>
- The relationship computed by this method is:
-
- symmetric: a.copyOf(b) == b.copyOf(a);
- not reflexive: a.copyOf(a) returns false;
- not transitive: if a.copyOf(b) is true and b.copyOf(c) is true, a.copyOf(c) is
- not necessarily true since it is possible that a == c.
- </div>
-</td>
-</tr>
-<tr id="i2" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#getActiveNodes-java.util.ArrayList-">getActiveNodes</a></span>(java.util.ArrayList&lt;<a href="../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a>&gt;&nbsp;activeNodes)</code>
-<div class="block">Calls <code>getActive(...)</code> on this output's
- source.</div>
-</td>
-</tr>
-<tr id="i3" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#getIndex--">getIndex</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i4" class="altColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#getSource--">getSource</a></span>()</code>&nbsp;</td>
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-<tr id="i5" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#mutate--">mutate</a></span>()</code>
-<div class="block">This method performs an arbitrary mutation on the <code>Mutable</code>.</div>
-</td>
-</tr>
-<tr id="i6" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#setSource-jcgp.backend.population.Connection-">setSource</a></span>(<a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</code>
-<div class="block">This method sets the output source to the specified connection.</div>
-</td>
-</tr>
-<tr id="i7" class="rowColor">
-<td class="colFirst"><code>java.lang.String</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Output.html#toString--">toString</a></span>()</code>&nbsp;</td>
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-</a>
-<h3>Methods inherited from class&nbsp;java.lang.Object</h3>
-<code>equals, getClass, hashCode, notify, notifyAll, wait, wait, wait</code></li>
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-<pre>public&nbsp;Output(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- int&nbsp;index)</pre>
-<div class="block">Makes a new instance of <code>Output</code> with the
- specified arguments.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>chromosome</code> - the chromosome this output belongs to.</dd>
-<dd><code>index</code> - the output index.</dd>
-</dl>
-</li>
-</ul>
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-<h4>calculate</h4>
-<pre>public&nbsp;java.lang.Object&nbsp;calculate()</pre>
-<dl>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>the value of the output's source.</dd>
-</dl>
-</li>
-</ul>
-<a name="getIndex--">
-<!-- -->
-</a>
-<ul class="blockList">
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-<h4>getIndex</h4>
-<pre>public&nbsp;int&nbsp;getIndex()</pre>
-<dl>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>this output's index.</dd>
-</dl>
-</li>
-</ul>
-<a name="setSource-jcgp.backend.population.Connection-">
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-<pre>public&nbsp;void&nbsp;setSource(<a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</pre>
-<div class="block">This method sets the output source to the specified connection.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>newConnection</code> - the <code>Connection</code> to connect to.</dd>
-</dl>
-</li>
-</ul>
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-<h4>getSource</h4>
-<pre>public&nbsp;<a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;getSource()</pre>
-<dl>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>the source of this output's value.</dd>
-</dl>
-</li>
-</ul>
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-<!-- -->
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-<pre>public&nbsp;void&nbsp;getActiveNodes(java.util.ArrayList&lt;<a href="../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a>&gt;&nbsp;activeNodes)</pre>
-<div class="block">Calls <code>getActive(...)</code> on this output's
- source. This kicks off a recursive process whereby
- all nodes connected to this output are added to the
- specified list of nodes. This is used to create a
- list of all active nodes.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>activeNodes</code> - the list to add all active nodes to.</dd>
-</dl>
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-</ul>
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-<pre>public&nbsp;boolean&nbsp;copyOf(<a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;m)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from interface:&nbsp;<code><a href="../../../jcgp/backend/population/Mutable.html#copyOf-jcgp.backend.population.Mutable-">Mutable</a></code></span></div>
-<div class="block">Asserts if the specified element is a copy of the elements
- this is called on.<br>
- This method returns true if and only if:
- <ul>
- <li>the elements being compared are not the same instance;</li>
- <li>the connections of the compared elements are not the same instance;</li>
- <li>the elements have the same function (in the case of Node);</li>
- <li>the grid position of the elements themselves are the same;</li>
- <li>the grid position of all equivalent connections are the same;</li>
- </ul>
- <br><br>
- The relationship computed by this method is:
- <ul>
- <li>symmetric: a.copyOf(b) == b.copyOf(a);</li>
- <li>not reflexive: a.copyOf(a) returns false;</li>
- <li>not transitive: if a.copyOf(b) is true and b.copyOf(c) is true, a.copyOf(c) is
- not necessarily true since it is possible that a == c.</li>
- </ul></div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../jcgp/backend/population/Mutable.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></code>&nbsp;in interface&nbsp;<code><a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></code></dd>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>m</code> - the mutable element to compare to.</dd>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>true if <code>element</code> is a copy of this element.</dd>
-</dl>
-</li>
-</ul>
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-<!-- -->
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-<h4>mutate</h4>
-<pre>public&nbsp;void&nbsp;mutate()</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from interface:&nbsp;<code><a href="../../../jcgp/backend/population/Mutable.html#mutate--">Mutable</a></code></span></div>
-<div class="block">This method performs an arbitrary mutation on the <code>Mutable</code>.
- <br><br>
- In the case of nodes, this chooses to mutate a function or connection
- fairly, and carries out the required mutation by using the node's own
- reference to chromosome.
- <br><br>
- In the case of outputs, this simply picks a random connection to serve
- as the source - any connection is allowed.</div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../jcgp/backend/population/Mutable.html#mutate--">mutate</a></code>&nbsp;in interface&nbsp;<code><a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></code></dd>
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-<pre>public&nbsp;java.lang.String&nbsp;toString()</pre>
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-<dd><code>toString</code>&nbsp;in class&nbsp;<code>java.lang.Object</code></dd>
-</dl>
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-</ul>
-</li>
-</ul>
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