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-rw-r--r--doc/allclasses-frame.html6
-rw-r--r--doc/allclasses-noframe.html6
-rw-r--r--doc/constant-values.html4
-rw-r--r--doc/deprecated-list.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.And.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.Mux1.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.Nand.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.Or.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.Xnor.html4
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-rw-r--r--doc/jcgp/backend/function/DigitalCircuitFunctions.html4
-rw-r--r--doc/jcgp/backend/function/Function.html4
-rw-r--r--doc/jcgp/backend/function/FunctionSet.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Absolute.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Addition.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Cosine.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.CosineAB.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Division.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Exponential.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicCosine.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicSine.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.HyperbolicTangent.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Hypotenuse.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.LogBaseTen.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Multiplication.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.NaturalLog.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Power.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Reciprocal.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Sine.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.SineAB.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.SquareRoot.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Subtraction.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.Tangent.html4
-rw-r--r--doc/jcgp/backend/function/SymbolicRegressionFunctions.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.AbsoluteCosineAB.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.AbsoluteSineAB.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.BoundedDivision.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.Cube.html4
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-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.ScaledAddition.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.ScaledExponential.html4
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-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html4
-rw-r--r--doc/jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html4
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-rw-r--r--doc/jcgp/backend/function/UnsignedInteger.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.And.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotA.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantOne.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantZero.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux1.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux2.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux3.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux4.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nand.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nor.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotA.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Or.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotA.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireA.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xnor.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xor.html4
-rw-r--r--doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.html4
-rw-r--r--doc/jcgp/backend/function/class-use/Function.html4
-rw-r--r--doc/jcgp/backend/function/class-use/FunctionSet.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Absolute.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Addition.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Cosine.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.CosineAB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Division.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Exponential.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicCosine.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicSine.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicTangent.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Hypotenuse.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.LogBaseTen.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Multiplication.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.NaturalLog.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Power.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Reciprocal.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Sine.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SineAB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SquareRoot.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Subtraction.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Tangent.html4
-rw-r--r--doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteCosineAB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteSineAB.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.BoundedDivision.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Cube.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Multiplication.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledAddition.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledExponential.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledHypotenuse.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Square.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquareRoot.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquaredMultiplication.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SymmetricSubtraction.html4
-rw-r--r--doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.html4
-rw-r--r--doc/jcgp/backend/function/class-use/UnsignedInteger.html4
-rw-r--r--doc/jcgp/backend/function/package-frame.html4
-rw-r--r--doc/jcgp/backend/function/package-summary.html4
-rw-r--r--doc/jcgp/backend/function/package-tree.html4
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-rw-r--r--doc/jcgp/backend/modules/Module.html4
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-rw-r--r--doc/jcgp/backend/modules/es/EvolutionaryStrategy.html4
-rw-r--r--doc/jcgp/backend/modules/es/MuPlusLambda.html4
-rw-r--r--doc/jcgp/backend/modules/es/TournamentSelection.html4
-rw-r--r--doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html21
-rw-r--r--doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html4
-rw-r--r--doc/jcgp/backend/modules/es/class-use/TournamentSelection.html4
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-rw-r--r--doc/jcgp/backend/modules/mutator/class-use/FixedPointMutator.html4
-rw-r--r--doc/jcgp/backend/modules/mutator/class-use/Mutator.html17
-rw-r--r--doc/jcgp/backend/modules/mutator/class-use/PercentPointMutator.html4
-rw-r--r--doc/jcgp/backend/modules/mutator/class-use/PointMutator.html4
-rw-r--r--doc/jcgp/backend/modules/mutator/class-use/ProbabilisticMutator.html4
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-rw-r--r--doc/jcgp/gui/population/GUIInput.html4
-rw-r--r--doc/jcgp/gui/population/GUINode.html4
-rw-r--r--doc/jcgp/gui/population/GUIOutput.html4
-rw-r--r--doc/jcgp/gui/population/PopulationPane.html4
-rw-r--r--doc/jcgp/gui/population/class-use/ChromosomePane.html4
-rw-r--r--doc/jcgp/gui/population/class-use/FunctionSelector.html4
-rw-r--r--doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html4
-rw-r--r--doc/jcgp/gui/population/class-use/GUIGene.html4
-rw-r--r--doc/jcgp/gui/population/class-use/GUIInput.html4
-rw-r--r--doc/jcgp/gui/population/class-use/GUINode.html4
-rw-r--r--doc/jcgp/gui/population/class-use/GUIOutput.html4
-rw-r--r--doc/jcgp/gui/population/class-use/PopulationPane.html4
-rw-r--r--doc/jcgp/gui/population/package-frame.html4
-rw-r--r--doc/jcgp/gui/population/package-summary.html4
-rw-r--r--doc/jcgp/gui/population/package-tree.html4
-rw-r--r--doc/jcgp/gui/population/package-use.html4
-rw-r--r--doc/jcgp/gui/settings/SettingsPane.html4
-rw-r--r--doc/jcgp/gui/settings/class-use/SettingsPane.html4
-rw-r--r--doc/jcgp/gui/settings/package-frame.html4
-rw-r--r--doc/jcgp/gui/settings/package-summary.html4
-rw-r--r--doc/jcgp/gui/settings/package-tree.html4
-rw-r--r--doc/jcgp/gui/settings/package-use.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/GUIBooleanParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/GUIDoubleParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/GUIIntegerParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/GUIParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/class-use/GUIBooleanParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/class-use/GUIDoubleParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/class-use/GUIIntegerParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/class-use/GUIParameter.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/package-frame.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/package-summary.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/package-tree.html4
-rw-r--r--doc/jcgp/gui/settings/parameters/package-use.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/TestCaseTable.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/class-use/TestCaseTable.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/package-frame.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/package-summary.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/package-tree.html4
-rw-r--r--doc/jcgp/gui/settings/testcase/package-use.html4
-rw-r--r--doc/jcgp/package-frame.html4
-rw-r--r--doc/jcgp/package-summary.html4
-rw-r--r--doc/jcgp/package-tree.html4
-rw-r--r--doc/jcgp/package-use.html4
-rw-r--r--doc/overview-frame.html4
-rw-r--r--doc/overview-summary.html4
-rw-r--r--doc/overview-tree.html6
-rw-r--r--src/jcgp/backend/modules/mutator/PointMutator.java42
-rw-r--r--src/jcgp/backend/modules/mutator/ProbabilisticMutator.java4
-rw-r--r--src/jcgp/backend/parsers/ChromosomeParser.java2
-rw-r--r--src/jcgp/backend/population/Chromosome.java26
-rw-r--r--src/jcgp/backend/population/Mutable.java22
-rw-r--r--src/jcgp/backend/population/Node.java41
-rw-r--r--src/jcgp/backend/population/Output.java51
-rw-r--r--src/jcgp/backend/tests/ChromosomeTests.java6
-rw-r--r--src/jcgp/backend/tests/OutputTests.java4
-rw-r--r--src/jcgp/gui/GUI.java247
-rw-r--r--src/jcgp/gui/console/ConsolePane.java (renamed from src/jcgp/gui/console/GUIConsole.java)4
-rw-r--r--src/jcgp/gui/population/GUIGene.java5
-rw-r--r--src/jcgp/gui/population/GUIOutput.java2
-rw-r--r--src/jcgp/gui/settings/parameters/GUIParameter.java2
355 files changed, 2332 insertions, 994 deletions
diff --git a/doc/allclasses-frame.html b/doc/allclasses-frame.html
index 4d8b0d4..a945739 100644
--- a/doc/allclasses-frame.html
+++ b/doc/allclasses-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>All Classes</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
@@ -20,6 +20,7 @@
<li><a href="jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers" target="classFrame">ChromosomeParser</a></li>
<li><a href="jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population" target="classFrame"><span class="interfaceName">Connection</span></a></li>
<li><a href="jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources" target="classFrame"><span class="interfaceName">Console</span></a></li>
+<li><a href="jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console" target="classFrame">ConsolePane</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.html" title="class in jcgp.backend.function" target="classFrame">DigitalCircuitFunctions</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.And.html" title="class in jcgp.backend.function" target="classFrame">DigitalCircuitFunctions.And</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.AndNotA.html" title="class in jcgp.backend.function" target="classFrame">DigitalCircuitFunctions.AndNotA</a></li>
@@ -52,7 +53,6 @@
<li><a href="jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function" target="classFrame">FunctionSet</a></li>
<li><a href="jcgp/gui/GUI.html" title="class in jcgp.gui" target="classFrame">GUI</a></li>
<li><a href="jcgp/gui/settings/parameters/GUIBooleanParameter.html" title="class in jcgp.gui.settings.parameters" target="classFrame">GUIBooleanParameter</a></li>
-<li><a href="jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console" target="classFrame">GUIConsole</a></li>
<li><a href="jcgp/gui/settings/parameters/GUIDoubleParameter.html" title="class in jcgp.gui.settings.parameters" target="classFrame">GUIDoubleParameter</a></li>
<li><a href="jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population" target="classFrame">GUIGene</a></li>
<li><a href="jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population" target="classFrame">GUIGene.GUIGeneState</a></li>
diff --git a/doc/allclasses-noframe.html b/doc/allclasses-noframe.html
index c5c077a..4c43000 100644
--- a/doc/allclasses-noframe.html
+++ b/doc/allclasses-noframe.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>All Classes</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
@@ -20,6 +20,7 @@
<li><a href="jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers">ChromosomeParser</a></li>
<li><a href="jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population"><span class="interfaceName">Connection</span></a></li>
<li><a href="jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources"><span class="interfaceName">Console</span></a></li>
+<li><a href="jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.html" title="class in jcgp.backend.function">DigitalCircuitFunctions</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.And.html" title="class in jcgp.backend.function">DigitalCircuitFunctions.And</a></li>
<li><a href="jcgp/backend/function/DigitalCircuitFunctions.AndNotA.html" title="class in jcgp.backend.function">DigitalCircuitFunctions.AndNotA</a></li>
@@ -52,7 +53,6 @@
<li><a href="jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function">FunctionSet</a></li>
<li><a href="jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></li>
<li><a href="jcgp/gui/settings/parameters/GUIBooleanParameter.html" title="class in jcgp.gui.settings.parameters">GUIBooleanParameter</a></li>
-<li><a href="jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></li>
<li><a href="jcgp/gui/settings/parameters/GUIDoubleParameter.html" title="class in jcgp.gui.settings.parameters">GUIDoubleParameter</a></li>
<li><a href="jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></li>
<li><a href="jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></li>
diff --git a/doc/constant-values.html b/doc/constant-values.html
index 5919c7f..6e6f170 100644
--- a/doc/constant-values.html
+++ b/doc/constant-values.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Constant Field Values</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
diff --git a/doc/deprecated-list.html b/doc/deprecated-list.html
index 21e1341..a03c7fa 100644
--- a/doc/deprecated-list.html
+++ b/doc/deprecated-list.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Deprecated List</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
diff --git a/doc/help-doc.html b/doc/help-doc.html
index a4dff0c..2080cc2 100644
--- a/doc/help-doc.html
+++ b/doc/help-doc.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>API Help</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
diff --git a/doc/index-files/index-1.html b/doc/index-files/index-1.html
index 6a80e84..930eb20 100644
--- a/doc/index-files/index-1.html
+++ b/doc/index-files/index-1.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>A-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-10.html b/doc/index-files/index-10.html
index 1bb7515..b6c43a6 100644
--- a/doc/index-files/index-10.html
+++ b/doc/index-files/index-10.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>J-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-11.html b/doc/index-files/index-11.html
index ab43c3d..7b3feeb 100644
--- a/doc/index-files/index-11.html
+++ b/doc/index-files/index-11.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>L-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-12.html b/doc/index-files/index-12.html
index 267c417..999529d 100644
--- a/doc/index-files/index-12.html
+++ b/doc/index-files/index-12.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>M-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-13.html b/doc/index-files/index-13.html
index 0a7c5ae..90318c6 100644
--- a/doc/index-files/index-13.html
+++ b/doc/index-files/index-13.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>N-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-14.html b/doc/index-files/index-14.html
index 308fcd6..29f2538 100644
--- a/doc/index-files/index-14.html
+++ b/doc/index-files/index-14.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>O-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-15.html b/doc/index-files/index-15.html
index d1f37d6..704a021 100644
--- a/doc/index-files/index-15.html
+++ b/doc/index-files/index-15.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>P-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -132,15 +132,6 @@
<dd>
<div class="block">Creates a new instance of PercentPointMutator.</div>
</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html" title="class in jcgp.backend.modules.problem">DigitalCircuitProblem</a></dt>
-<dd>&nbsp;</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></dt>
-<dd>
-<div class="block">Used to assert whether a given population contains a perfect solution
- to the problem.</div>
-</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html" title="class in jcgp.backend.modules.problem">SymbolicRegressionProblem</a></dt>
-<dd>&nbsp;</dd>
<dt><a href="../jcgp/backend/modules/mutator/PointMutator.html" title="class in jcgp.backend.modules.mutator"><span class="typeNameLink">PointMutator</span></a> - Class in <a href="../jcgp/backend/modules/mutator/package-summary.html">jcgp.backend.modules.mutator</a></dt>
<dd>
<div class="block">Point mutator
@@ -170,6 +161,10 @@
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/SymbolicRegressionFunctions.Power.html#Power--">Power()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/SymbolicRegressionFunctions.Power.html" title="class in jcgp.backend.function">SymbolicRegressionFunctions.Power</a></dt>
<dd>&nbsp;</dd>
+<dt><span class="memberNameLink"><a href="../jcgp/backend/parsers/ChromosomeParser.html#print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">print(Chromosome, Resources)</a></span> - Static method in class jcgp.backend.parsers.<a href="../jcgp/backend/parsers/ChromosomeParser.html" title="class in jcgp.backend.parsers">ChromosomeParser</a></dt>
+<dd>
+<div class="block">Writes a chromosome to the console in .chr format.</div>
+</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/Console.html#print-java.lang.String-">print(String)</a></span> - Method in interface jcgp.backend.resources.<a href="../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></dt>
<dd>
<div class="block">Prints a string without line break at the end (unless the string
@@ -180,7 +175,7 @@
<div class="block">Prints a message to the consoles ignoring
report interval.</div>
</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/gui/console/GUIConsole.html#print-java.lang.String-">print(String)</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></dt>
+<dt><span class="memberNameLink"><a href="../jcgp/gui/console/ConsolePane.html#print-java.lang.String-">print(String)</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></dt>
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/resources/Console.html#println-java.lang.String-">println(String)</a></span> - Method in interface jcgp.backend.resources.<a href="../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></dt>
<dd>
@@ -191,7 +186,7 @@
<div class="block">Prints a message to the consoles ignoring
report interval.</div>
</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/gui/console/GUIConsole.html#println-java.lang.String-">println(String)</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></dt>
+<dt><span class="memberNameLink"><a href="../jcgp/gui/console/ConsolePane.html#println-java.lang.String-">println(String)</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></dt>
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/population/Chromosome.html#printNodes--">printNodes()</a></span> - Method in class jcgp.backend.population.<a href="../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a></dt>
<dd>
diff --git a/doc/index-files/index-16.html b/doc/index-files/index-16.html
index 5f2eef1..f7d6bbb 100644
--- a/doc/index-files/index-16.html
+++ b/doc/index-files/index-16.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>R-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-17.html b/doc/index-files/index-17.html
index b609fb2..b279eb1 100644
--- a/doc/index-files/index-17.html
+++ b/doc/index-files/index-17.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>S-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-18.html b/doc/index-files/index-18.html
index 81fdf2b..ed24a92 100644
--- a/doc/index-files/index-18.html
+++ b/doc/index-files/index-18.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>T-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-19.html b/doc/index-files/index-19.html
index 6a35cb4..88a6413 100644
--- a/doc/index-files/index-19.html
+++ b/doc/index-files/index-19.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>U-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-2.html b/doc/index-files/index-2.html
index 186fecc..92997ff 100644
--- a/doc/index-files/index-2.html
+++ b/doc/index-files/index-2.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>B-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -81,7 +81,10 @@
<dt><span class="memberNameLink"><a href="../jcgp/gui/settings/parameters/GUIParameter.html#BASE_TEXT_STYLE">BASE_TEXT_STYLE</a></span> - Static variable in class jcgp.gui.settings.parameters.<a href="../jcgp/gui/settings/parameters/GUIParameter.html" title="class in jcgp.gui.settings.parameters">GUIParameter</a></dt>
<dd>&nbsp;</dd>
<dt><a href="../jcgp/backend/modules/problem/BestFitness.html" title="enum in jcgp.backend.modules.problem"><span class="typeNameLink">BestFitness</span></a> - Enum in <a href="../jcgp/backend/modules/problem/package-summary.html">jcgp.backend.modules.problem</a></dt>
-<dd>&nbsp;</dd>
+<dd>
+<div class="block">Enum type to allow problems to indicate their fitness
+ orientation.</div>
+</dd>
<dt><a href="../jcgp/backend/parameters/monitors/BooleanMonitor.html" title="class in jcgp.backend.parameters.monitors"><span class="typeNameLink">BooleanMonitor</span></a> - Class in <a href="../jcgp/backend/parameters/monitors/package-summary.html">jcgp.backend.parameters.monitors</a></dt>
<dd>
<div class="block">This is a special type of <code>BooleanParameter</code> which
diff --git a/doc/index-files/index-20.html b/doc/index-files/index-20.html
index 83339e6..1a78e05 100644
--- a/doc/index-files/index-20.html
+++ b/doc/index-files/index-20.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>V-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-21.html b/doc/index-files/index-21.html
index 308eabe..652ffa2 100644
--- a/doc/index-files/index-21.html
+++ b/doc/index-files/index-21.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>W-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-22.html b/doc/index-files/index-22.html
index 9e8da56..5039c54 100644
--- a/doc/index-files/index-22.html
+++ b/doc/index-files/index-22.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>X-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-3.html b/doc/index-files/index-3.html
index 7b7d4d2..9549185 100644
--- a/doc/index-files/index-3.html
+++ b/doc/index-files/index-3.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>C-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -128,6 +128,14 @@
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#CONSOLE_MIN_HEIGHT">CONSOLE_MIN_HEIGHT</a></span> - Static variable in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd>&nbsp;</dd>
+<dt><a href="../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console"><span class="typeNameLink">ConsolePane</span></a> - Class in <a href="../jcgp/gui/console/package-summary.html">jcgp.gui.console</a></dt>
+<dd>
+<div class="block">Console pane used by the GUI to display CGP output messages.</div>
+</dd>
+<dt><span class="memberNameLink"><a href="../jcgp/gui/console/ConsolePane.html#ConsolePane--">ConsolePane()</a></span> - Constructor for class jcgp.gui.console.<a href="../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></dt>
+<dd>
+<div class="block">Creates a new instance of this class.</div>
+</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html#ConstantOne--">ConstantOne()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html" title="class in jcgp.backend.function">DigitalCircuitFunctions.ConstantOne</a></dt>
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html#ConstantZero--">ConstantZero()</a></span> - Constructor for class jcgp.backend.function.<a href="../jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html" title="class in jcgp.backend.function">DigitalCircuitFunctions.ConstantZero</a></dt>
diff --git a/doc/index-files/index-4.html b/doc/index-files/index-4.html
index d78174e..38673b5 100644
--- a/doc/index-files/index-4.html
+++ b/doc/index-files/index-4.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>D-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-5.html b/doc/index-files/index-5.html
index a056ba9..70705a5 100644
--- a/doc/index-files/index-5.html
+++ b/doc/index-files/index-5.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>E-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index-files/index-6.html b/doc/index-files/index-6.html
index 925008d..8512e0b 100644
--- a/doc/index-files/index-6.html
+++ b/doc/index-files/index-6.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>F-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -92,7 +92,7 @@
<dd>
<div class="block">Outputs all buffered messages to the console.</div>
</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/gui/console/GUIConsole.html#flush--">flush()</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></dt>
+<dt><span class="memberNameLink"><a href="../jcgp/gui/console/ConsolePane.html#flush--">flush()</a></span> - Method in class jcgp.gui.console.<a href="../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></dt>
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#flushConsole--">flushConsole()</a></span> - Method in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd>&nbsp;</dd>
diff --git a/doc/index-files/index-7.html b/doc/index-files/index-7.html
index 30395b3..fe440f2 100644
--- a/doc/index-files/index-7.html
+++ b/doc/index-files/index-7.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>G-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -464,7 +464,7 @@
<dd>&nbsp;</dd>
<dt><a href="../jcgp/gui/GUI.html" title="class in jcgp.gui"><span class="typeNameLink">GUI</span></a> - Class in <a href="../jcgp/gui/package-summary.html">jcgp.gui</a></dt>
<dd>
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).</div>
</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#GUI--">GUI()</a></span> - Constructor for class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd>&nbsp;</dd>
@@ -473,14 +473,6 @@
<div class="block">This extension of @code{GUIParameter} uses a @code{CheckBox} to display
the value of a @code{BooleanParameter}.</div>
</dd>
-<dt><a href="../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console"><span class="typeNameLink">GUIConsole</span></a> - Class in <a href="../jcgp/gui/console/package-summary.html">jcgp.gui.console</a></dt>
-<dd>
-<div class="block">Console pane used by the GUI to display CGP output messages.</div>
-</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/gui/console/GUIConsole.html#GUIConsole--">GUIConsole()</a></span> - Constructor for class jcgp.gui.console.<a href="../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></dt>
-<dd>
-<div class="block">Creates a new instance of this class.</div>
-</dd>
<dt><a href="../jcgp/gui/settings/parameters/GUIDoubleParameter.html" title="class in jcgp.gui.settings.parameters"><span class="typeNameLink">GUIDoubleParameter</span></a> - Class in <a href="../jcgp/gui/settings/parameters/package-summary.html">jcgp.gui.settings.parameters</a></dt>
<dd>
<div class="block">This extension of @code{GUIParameter} uses a @code{TextField} to display
diff --git a/doc/index-files/index-8.html b/doc/index-files/index-8.html
index 1f4c14a..0e628a8 100644
--- a/doc/index-files/index-8.html
+++ b/doc/index-files/index-8.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>H-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -76,14 +76,21 @@
<dl>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#HARD_HIGHLIGHT_COLOUR">HARD_HIGHLIGHT_COLOUR</a></span> - Static variable in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd>&nbsp;</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html" title="class in jcgp.backend.modules.problem">DigitalCircuitProblem</a></dt>
-<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></dt>
<dd>
<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
the current best chromosome.</div>
</dd>
-<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html" title="class in jcgp.backend.modules.problem">SymbolicRegressionProblem</a></dt>
+<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/TestCaseProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/TestCaseProblem.html" title="class in jcgp.backend.modules.problem">TestCaseProblem</a></dt>
+<dd>&nbsp;</dd>
+<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/DigitalCircuitProblem.html" title="class in jcgp.backend.modules.problem">DigitalCircuitProblem</a></dt>
+<dd>&nbsp;</dd>
+<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></dt>
+<dd>
+<div class="block">Used to assert whether a given population contains a perfect solution
+ to the problem.</div>
+</dd>
+<dt><span class="memberNameLink"><a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution(Population)</a></span> - Method in class jcgp.backend.modules.problem.<a href="../jcgp/backend/modules/problem/SymbolicRegressionProblem.html" title="class in jcgp.backend.modules.problem">SymbolicRegressionProblem</a></dt>
<dd>&nbsp;</dd>
<dt><span class="memberNameLink"><a href="../jcgp/gui/GUI.html#hideGeneValues--">hideGeneValues()</a></span> - Method in class jcgp.gui.<a href="../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></dt>
<dd>&nbsp;</dd>
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<!-- NewPage -->
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>I-Index</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/index.html b/doc/index.html
index 1c00fb3..7077db1 100644
--- a/doc/index.html
+++ b/doc/index.html
@@ -2,7 +2,7 @@
<!-- NewPage -->
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Generated Documentation (Untitled)</title>
<script type="text/javascript">
targetPage = "" + window.location.search;
diff --git a/doc/jcgp/JCGP.html b/doc/jcgp/JCGP.html
index 9005792..9288ea8 100644
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+++ b/doc/jcgp/JCGP.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>JCGP</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
@@ -166,7 +166,7 @@ extends java.lang.Object</pre>
<th class="colLast" scope="col">Method and Description</th>
</tr>
<tr id="i0" class="altColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>&gt;</code></td>
+<td class="colFirst"><code><a href="../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>[]</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../jcgp/JCGP.html#getEvolutionaryStrategies--">getEvolutionaryStrategies</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i1" class="rowColor">
@@ -178,7 +178,7 @@ extends java.lang.Object</pre>
<td class="colLast"><code><span class="memberNameLink"><a href="../jcgp/JCGP.html#getMutator--">getMutator</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i3" class="rowColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&gt;</code></td>
+<td class="colFirst"><code><a href="../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>[]</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../jcgp/JCGP.html#getMutators--">getMutators</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i4" class="altColor">
@@ -190,7 +190,7 @@ extends java.lang.Object</pre>
<td class="colLast"><code><span class="memberNameLink"><a href="../jcgp/JCGP.html#getProblem--">getProblem</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i6" class="altColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>&gt;</code></td>
+<td class="colFirst"><code><a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>[]</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../jcgp/JCGP.html#getProblems--">getProblems</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i7" class="rowColor">
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+<pre>public&nbsp;<a href="../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>[]&nbsp;getMutators()</pre>
<dl>
<dt><span class="returnLabel">Returns:</span></dt>
<dd>a complete list of the experiment's mutators.</dd>
@@ -398,7 +398,7 @@ extends java.lang.Object</pre>
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+<pre>public&nbsp;<a href="../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>[]&nbsp;getEvolutionaryStrategies()</pre>
<dl>
<dt><span class="returnLabel">Returns:</span></dt>
<dd>a complete list of the experiment's evolutionary strategies.</dd>
@@ -424,7 +424,7 @@ extends java.lang.Object</pre>
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-<pre>public&nbsp;java.util.ArrayList&lt;<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>&gt;&nbsp;getProblems()</pre>
+<pre>public&nbsp;<a href="../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>[]&nbsp;getProblems()</pre>
<dl>
<dt><span class="returnLabel">Returns:</span></dt>
<dd>a complete list of the experiment's problem types.</dd>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.And.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.And.html
index 23a7de4..3656272 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.And.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.And.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.And</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotA.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotA.html
index c6817a3..7cf095a 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotA.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.AndNotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotB.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotB.html
index d42241d..340abe4 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.AndNotB.html
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@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.AndNotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html
index 96689f1..a65269f 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantOne.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.ConstantOne</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html
index b21a7c7..9b4f618 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.ConstantZero.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.ConstantZero</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux1.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux1.html
index 3b93699..e798c93 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux1.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Mux1</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux2.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux2.html
index 951ed18..1190ccd 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux2.html
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@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Mux2</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux3.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux3.html
index 56c9c00..65869a6 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux3.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux3.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Mux3</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux4.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux4.html
index 044bccc..2525871 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux4.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Mux4.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Mux4</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Nand.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Nand.html
index 1239ab6..9db3746 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Nand.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Nand.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Nand</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Nor.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Nor.html
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--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Nor.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Nor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Nor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.NotA.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.NotA.html
index 2cb1bc7..120adb5 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.NotA.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.NotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.NotB.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.NotB.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.NotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Or.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Or.html
index f393976..a50098b 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Or.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Or.html
@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Or</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotA.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotA.html
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--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotA.html
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@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.OrNotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
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<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotB.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotB.html
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--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.OrNotB.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.OrNotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.WireA.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.WireA.html
index 1f02741..9804f47 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.WireA.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.WireA.html
@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.WireA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.WireB.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.WireB.html
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--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.WireB.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.WireB.html
@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.WireB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Xnor.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Xnor.html
index b9bfed3..552cb85 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Xnor.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Xnor.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Xnor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.Xor.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.Xor.html
index 2d0a535..68a06aa 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.Xor.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.Xor.html
@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions.Xor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/DigitalCircuitFunctions.html b/doc/jcgp/backend/function/DigitalCircuitFunctions.html
index 071507e..9cec663 100644
--- a/doc/jcgp/backend/function/DigitalCircuitFunctions.html
+++ b/doc/jcgp/backend/function/DigitalCircuitFunctions.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitFunctions</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/Function.html b/doc/jcgp/backend/function/Function.html
index e08145b..2dff53f 100644
--- a/doc/jcgp/backend/function/Function.html
+++ b/doc/jcgp/backend/function/Function.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Function</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/FunctionSet.html b/doc/jcgp/backend/function/FunctionSet.html
index cca036d..8196218 100644
--- a/doc/jcgp/backend/function/FunctionSet.html
+++ b/doc/jcgp/backend/function/FunctionSet.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>FunctionSet</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/SymbolicRegressionFunctions.Absolute.html b/doc/jcgp/backend/function/SymbolicRegressionFunctions.Absolute.html
index 786917e..bdc2547 100644
--- a/doc/jcgp/backend/function/SymbolicRegressionFunctions.Absolute.html
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@@ -2,9 +2,9 @@
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>SymbolicRegressionFunctions.Absolute</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/SymbolicRegressionFunctions.Addition.html b/doc/jcgp/backend/function/SymbolicRegressionFunctions.Addition.html
index 537e2e1..3f52052 100644
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>SymbolicRegressionFunctions.Addition</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/SymbolicRegressionFunctions.Cosine.html b/doc/jcgp/backend/function/SymbolicRegressionFunctions.Cosine.html
index 3769145..17270ed 100644
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>SymbolicRegressionFunctions.Cosine</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/SymbolicRegressionFunctions.CosineAB.html b/doc/jcgp/backend/function/SymbolicRegressionFunctions.CosineAB.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>SymbolicRegressionFunctions.CosineAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/SymbolicRegressionFunctions.Division.html b/doc/jcgp/backend/function/SymbolicRegressionFunctions.Division.html
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index cb4feb3..6650d87 100644
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<title>TravellingSalesmanFunctions.SquareRoot</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html b/doc/jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html
index 4eb9cd0..d4a0779 100644
--- a/doc/jcgp/backend/function/TravellingSalesmanFunctions.SquaredMultiplication.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>TravellingSalesmanFunctions.SquaredMultiplication</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html b/doc/jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html
index 3e194dc..c242aa4 100644
--- a/doc/jcgp/backend/function/TravellingSalesmanFunctions.SymmetricSubtraction.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>TravellingSalesmanFunctions.SymmetricSubtraction</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/TravellingSalesmanFunctions.html b/doc/jcgp/backend/function/TravellingSalesmanFunctions.html
index fbc5b00..4112b06 100644
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>TravellingSalesmanFunctions</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/UnsignedInteger.html b/doc/jcgp/backend/function/UnsignedInteger.html
index ca02b07..e3f1de9 100644
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>UnsignedInteger</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.And.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.And.html
index 107e22d..6c30f5c 100644
--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.And.html
+++ b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.And.html
@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.And</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotA.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotA.html
index a7b3439..2353649 100644
--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotA.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.AndNotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotB.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotB.html
index 31510c1..ec7c494 100644
--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.AndNotB.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.AndNotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantOne.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantOne.html
index dec308e..6e9a120 100644
--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantOne.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.ConstantOne</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantZero.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantZero.html
index f80f3a7..476c0ee 100644
--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.ConstantZero.html
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@@ -2,9 +2,9 @@
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.ConstantZero</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux1.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux1.html
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--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux1.html
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@@ -2,9 +2,9 @@
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Mux1</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux2.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux2.html
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--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux2.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Mux2</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux3.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux3.html
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--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux3.html
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@@ -2,9 +2,9 @@
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Mux3</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux4.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux4.html
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--- a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Mux4.html
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@@ -2,9 +2,9 @@
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Mux4</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nand.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nand.html
index ffe458b..8b7140d 100644
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Nand</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nor.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Nor.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Nor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotA.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotA.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.NotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotB.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.NotB.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.NotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Or.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Or.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Or</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotA.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotA.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.OrNotA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotB.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.OrNotB.html
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.OrNotB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireA.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireA.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.WireA</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireB.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.WireB.html
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.WireB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xnor.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xnor.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Xnor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xor.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.Xor.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions.Xor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.html b/doc/jcgp/backend/function/class-use/DigitalCircuitFunctions.html
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.DigitalCircuitFunctions</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/Function.html b/doc/jcgp/backend/function/class-use/Function.html
index e20c5cb..07a3334 100644
--- a/doc/jcgp/backend/function/class-use/Function.html
+++ b/doc/jcgp/backend/function/class-use/Function.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.Function</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/FunctionSet.html b/doc/jcgp/backend/function/class-use/FunctionSet.html
index e736cd7..87dca18 100644
--- a/doc/jcgp/backend/function/class-use/FunctionSet.html
+++ b/doc/jcgp/backend/function/class-use/FunctionSet.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.FunctionSet</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Absolute.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Absolute.html
index ea69f0f..febfcc5 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Absolute.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Absolute.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Absolute</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Addition.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Addition.html
index f3baa3a..c2c43a1 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Addition.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Addition.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Addition</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Cosine.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Cosine.html
index 136b8d2..5b76af7 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Cosine.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Cosine.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Cosine</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.CosineAB.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.CosineAB.html
index a5975a7..6fc5bf5 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.CosineAB.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.CosineAB.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.CosineAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Division.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Division.html
index 52a8a52..29df7b2 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Division.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Division.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Division</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Exponential.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Exponential.html
index 8b5bfc1..c98c42a 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Exponential.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Exponential.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Exponential</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicCosine.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicCosine.html
index b7076a0..d256e11 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicCosine.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicCosine.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.HyperbolicCosine</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicSine.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicSine.html
index b754a81..4a4c378 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicSine.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicSine.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.HyperbolicSine</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicTangent.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicTangent.html
index 3270007..2491f0c 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicTangent.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.HyperbolicTangent.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.HyperbolicTangent</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Hypotenuse.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Hypotenuse.html
index 182e596..ab0da37 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Hypotenuse.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Hypotenuse.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Hypotenuse</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.LogBaseTen.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.LogBaseTen.html
index 9687b65..7d76e1b 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.LogBaseTen.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.LogBaseTen.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.LogBaseTen</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Multiplication.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Multiplication.html
index 931f7b5..83efb7f 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Multiplication.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Multiplication.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Multiplication</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.NaturalLog.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.NaturalLog.html
index 2f4a062..1057961 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.NaturalLog.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.NaturalLog.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.NaturalLog</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Power.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Power.html
index 24e0325..0b45e51 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Power.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Power.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Power</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Reciprocal.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Reciprocal.html
index f756d5e..0b20bff 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Reciprocal.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Reciprocal.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Reciprocal</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Sine.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Sine.html
index 56b42c8..673f3af 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Sine.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Sine.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Sine</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SineAB.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SineAB.html
index b814c7d..79b0cf3 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SineAB.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SineAB.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.SineAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SquareRoot.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SquareRoot.html
index 7832d14..7d3472c 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SquareRoot.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.SquareRoot.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.SquareRoot</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Subtraction.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Subtraction.html
index 51f4440..6471a54 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Subtraction.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Subtraction.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Subtraction</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Tangent.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Tangent.html
index edca5ad..3e99722 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Tangent.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.Tangent.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions.Tangent</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.html b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.html
index 78c1a06..0e9b8a8 100644
--- a/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.html
+++ b/doc/jcgp/backend/function/class-use/SymbolicRegressionFunctions.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.SymbolicRegressionFunctions</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteCosineAB.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteCosineAB.html
index c6cbc89..e358b1d 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteCosineAB.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteCosineAB.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.AbsoluteCosineAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html
index 28d9dd3..1091f1e 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.AbsoluteHyperbolicTangentAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteSineAB.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteSineAB.html
index db4d5a4..03a7053 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteSineAB.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.AbsoluteSineAB.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.AbsoluteSineAB</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.BoundedDivision.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.BoundedDivision.html
index 658d989..7eb87f7 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.BoundedDivision.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.BoundedDivision.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.BoundedDivision</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Cube.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Cube.html
index 8b0dfc0..b052a51 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Cube.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Cube.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.Cube</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Multiplication.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Multiplication.html
index 345272a..8034413 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Multiplication.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Multiplication.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.Multiplication</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledAddition.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledAddition.html
index a74370a..b07379a 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledAddition.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledAddition.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.ScaledAddition</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledExponential.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledExponential.html
index 4e57613..cc867ed 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledExponential.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledExponential.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.ScaledExponential</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledHypotenuse.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledHypotenuse.html
index c80ed8d..8b63bf4 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledHypotenuse.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.ScaledHypotenuse.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.ScaledHypotenuse</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Square.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Square.html
index ad84b0b..e317ae1 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Square.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.Square.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.Square</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquareRoot.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquareRoot.html
index 2937ad2..4bd5157 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquareRoot.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquareRoot.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.SquareRoot</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquaredMultiplication.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquaredMultiplication.html
index 143e69e..86d4a95 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquaredMultiplication.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SquaredMultiplication.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.SquaredMultiplication</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SymmetricSubtraction.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SymmetricSubtraction.html
index 6405a7f..3d3bbd0 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SymmetricSubtraction.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.SymmetricSubtraction.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions.SymmetricSubtraction</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.html b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.html
index 8e0477e..ea52bd8 100644
--- a/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.html
+++ b/doc/jcgp/backend/function/class-use/TravellingSalesmanFunctions.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.TravellingSalesmanFunctions</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/class-use/UnsignedInteger.html b/doc/jcgp/backend/function/class-use/UnsignedInteger.html
index 6dde36f..ad1f0c0 100644
--- a/doc/jcgp/backend/function/class-use/UnsignedInteger.html
+++ b/doc/jcgp/backend/function/class-use/UnsignedInteger.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.function.UnsignedInteger</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/package-frame.html b/doc/jcgp/backend/function/package-frame.html
index 76cc057..fbf34c2 100644
--- a/doc/jcgp/backend/function/package-frame.html
+++ b/doc/jcgp/backend/function/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.function</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/package-summary.html b/doc/jcgp/backend/function/package-summary.html
index 9742940..464d996 100644
--- a/doc/jcgp/backend/function/package-summary.html
+++ b/doc/jcgp/backend/function/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.function</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/package-tree.html b/doc/jcgp/backend/function/package-tree.html
index 52fc595..3ffdef4 100644
--- a/doc/jcgp/backend/function/package-tree.html
+++ b/doc/jcgp/backend/function/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.function Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/function/package-use.html b/doc/jcgp/backend/function/package-use.html
index 6622f40..2eef87f 100644
--- a/doc/jcgp/backend/function/package-use.html
+++ b/doc/jcgp/backend/function/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.function</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/Module.html b/doc/jcgp/backend/modules/Module.html
index b194964..39193c8 100644
--- a/doc/jcgp/backend/modules/Module.html
+++ b/doc/jcgp/backend/modules/Module.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>Module</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/class-use/Module.html b/doc/jcgp/backend/modules/class-use/Module.html
index 6ab68d0..d47eade 100644
--- a/doc/jcgp/backend/modules/class-use/Module.html
+++ b/doc/jcgp/backend/modules/class-use/Module.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.Module</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/EvolutionaryStrategy.html b/doc/jcgp/backend/modules/es/EvolutionaryStrategy.html
index d18e01f..ba869dc 100644
--- a/doc/jcgp/backend/modules/es/EvolutionaryStrategy.html
+++ b/doc/jcgp/backend/modules/es/EvolutionaryStrategy.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>EvolutionaryStrategy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/MuPlusLambda.html b/doc/jcgp/backend/modules/es/MuPlusLambda.html
index 3ca75c9..3ffda1d 100644
--- a/doc/jcgp/backend/modules/es/MuPlusLambda.html
+++ b/doc/jcgp/backend/modules/es/MuPlusLambda.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>MuPlusLambda</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/TournamentSelection.html b/doc/jcgp/backend/modules/es/TournamentSelection.html
index 59e63cd..fcf0ab0 100644
--- a/doc/jcgp/backend/modules/es/TournamentSelection.html
+++ b/doc/jcgp/backend/modules/es/TournamentSelection.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>TournamentSelection</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html b/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html
index ed70f1e..b2550cc 100644
--- a/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html
+++ b/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.es.EvolutionaryStrategy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
@@ -107,24 +107,15 @@
</tr>
<tbody>
<tr class="altColor">
+<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>[]</code></td>
+<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getEvolutionaryStrategies--">getEvolutionaryStrategies</a></span>()</code>&nbsp;</td>
+</tr>
+<tr class="rowColor">
<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></code></td>
<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getEvolutionaryStrategy--">getEvolutionaryStrategy</a></span>()</code>&nbsp;</td>
</tr>
</tbody>
</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../../jcgp/package-summary.html">jcgp</a> that return types with arguments of type <a href="../../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>&gt;</code></td>
-<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getEvolutionaryStrategies--">getEvolutionaryStrategies</a></span>()</code>&nbsp;</td>
-</tr>
-</tbody>
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</li>
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diff --git a/doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html b/doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html
index 7b38f2a..a056251 100644
--- a/doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html
+++ b/doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.es.MuPlusLambda</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/class-use/TournamentSelection.html b/doc/jcgp/backend/modules/es/class-use/TournamentSelection.html
index 3de5cbb..0ba676a 100644
--- a/doc/jcgp/backend/modules/es/class-use/TournamentSelection.html
+++ b/doc/jcgp/backend/modules/es/class-use/TournamentSelection.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.es.TournamentSelection</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/package-frame.html b/doc/jcgp/backend/modules/es/package-frame.html
index 2341ef5..7c924f1 100644
--- a/doc/jcgp/backend/modules/es/package-frame.html
+++ b/doc/jcgp/backend/modules/es/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.es</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/package-summary.html b/doc/jcgp/backend/modules/es/package-summary.html
index bb760c8..9c461bb 100644
--- a/doc/jcgp/backend/modules/es/package-summary.html
+++ b/doc/jcgp/backend/modules/es/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.es</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/package-tree.html b/doc/jcgp/backend/modules/es/package-tree.html
index 5ebca47..8557554 100644
--- a/doc/jcgp/backend/modules/es/package-tree.html
+++ b/doc/jcgp/backend/modules/es/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.es Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/es/package-use.html b/doc/jcgp/backend/modules/es/package-use.html
index a9a2c2d..59c0edb 100644
--- a/doc/jcgp/backend/modules/es/package-use.html
+++ b/doc/jcgp/backend/modules/es/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.modules.es</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/FixedPointMutator.html b/doc/jcgp/backend/modules/mutator/FixedPointMutator.html
index 3614df1..5144aa7 100644
--- a/doc/jcgp/backend/modules/mutator/FixedPointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/FixedPointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>FixedPointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/Mutator.html b/doc/jcgp/backend/modules/mutator/Mutator.html
index 13aafdb..d0f58a2 100644
--- a/doc/jcgp/backend/modules/mutator/Mutator.html
+++ b/doc/jcgp/backend/modules/mutator/Mutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>Mutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/PercentPointMutator.html b/doc/jcgp/backend/modules/mutator/PercentPointMutator.html
index 968640e..600b5a9 100644
--- a/doc/jcgp/backend/modules/mutator/PercentPointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/PercentPointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>PercentPointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/PointMutator.html b/doc/jcgp/backend/modules/mutator/PointMutator.html
index 691eece..4f424d1 100644
--- a/doc/jcgp/backend/modules/mutator/PointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/PointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>PointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/ProbabilisticMutator.html b/doc/jcgp/backend/modules/mutator/ProbabilisticMutator.html
index c4e22ae..13b20c1 100644
--- a/doc/jcgp/backend/modules/mutator/ProbabilisticMutator.html
+++ b/doc/jcgp/backend/modules/mutator/ProbabilisticMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>ProbabilisticMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/class-use/FixedPointMutator.html b/doc/jcgp/backend/modules/mutator/class-use/FixedPointMutator.html
index 695222a..3adb39d 100644
--- a/doc/jcgp/backend/modules/mutator/class-use/FixedPointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/class-use/FixedPointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.mutator.FixedPointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/class-use/Mutator.html b/doc/jcgp/backend/modules/mutator/class-use/Mutator.html
index 3107012..f1657ee 100644
--- a/doc/jcgp/backend/modules/mutator/class-use/Mutator.html
+++ b/doc/jcgp/backend/modules/mutator/class-use/Mutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.mutator.Mutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
@@ -114,17 +114,8 @@
<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a></code></td>
<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getMutator--">getMutator</a></span>()</code>&nbsp;</td>
</tr>
-</tbody>
-</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../../jcgp/package-summary.html">jcgp</a> that return types with arguments of type <a href="../../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&gt;</code></td>
+<tr class="rowColor">
+<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>[]</code></td>
<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getMutators--">getMutators</a></span>()</code>&nbsp;</td>
</tr>
</tbody>
diff --git a/doc/jcgp/backend/modules/mutator/class-use/PercentPointMutator.html b/doc/jcgp/backend/modules/mutator/class-use/PercentPointMutator.html
index f605d5a..8edb1d6 100644
--- a/doc/jcgp/backend/modules/mutator/class-use/PercentPointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/class-use/PercentPointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.mutator.PercentPointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/class-use/PointMutator.html b/doc/jcgp/backend/modules/mutator/class-use/PointMutator.html
index feeb525..f1f1704 100644
--- a/doc/jcgp/backend/modules/mutator/class-use/PointMutator.html
+++ b/doc/jcgp/backend/modules/mutator/class-use/PointMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.mutator.PointMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/class-use/ProbabilisticMutator.html b/doc/jcgp/backend/modules/mutator/class-use/ProbabilisticMutator.html
index 0186442..5dd6483 100644
--- a/doc/jcgp/backend/modules/mutator/class-use/ProbabilisticMutator.html
+++ b/doc/jcgp/backend/modules/mutator/class-use/ProbabilisticMutator.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.mutator.ProbabilisticMutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/package-frame.html b/doc/jcgp/backend/modules/mutator/package-frame.html
index da1968b..c0dee3f 100644
--- a/doc/jcgp/backend/modules/mutator/package-frame.html
+++ b/doc/jcgp/backend/modules/mutator/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.mutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/package-summary.html b/doc/jcgp/backend/modules/mutator/package-summary.html
index a5bfb94..7bd73c1 100644
--- a/doc/jcgp/backend/modules/mutator/package-summary.html
+++ b/doc/jcgp/backend/modules/mutator/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.mutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/package-tree.html b/doc/jcgp/backend/modules/mutator/package-tree.html
index a83ce31..17d0c8e 100644
--- a/doc/jcgp/backend/modules/mutator/package-tree.html
+++ b/doc/jcgp/backend/modules/mutator/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.mutator Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/mutator/package-use.html b/doc/jcgp/backend/modules/mutator/package-use.html
index d0f85c6..052c57a 100644
--- a/doc/jcgp/backend/modules/mutator/package-use.html
+++ b/doc/jcgp/backend/modules/mutator/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.modules.mutator</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/package-frame.html b/doc/jcgp/backend/modules/package-frame.html
index 876d8f2..b9cba5d 100644
--- a/doc/jcgp/backend/modules/package-frame.html
+++ b/doc/jcgp/backend/modules/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/package-summary.html b/doc/jcgp/backend/modules/package-summary.html
index cd347f1..856727f 100644
--- a/doc/jcgp/backend/modules/package-summary.html
+++ b/doc/jcgp/backend/modules/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/package-tree.html b/doc/jcgp/backend/modules/package-tree.html
index 3be8d8f..c3800a3 100644
--- a/doc/jcgp/backend/modules/package-tree.html
+++ b/doc/jcgp/backend/modules/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/package-use.html b/doc/jcgp/backend/modules/package-use.html
index 8c933e0..ae3715a 100644
--- a/doc/jcgp/backend/modules/package-use.html
+++ b/doc/jcgp/backend/modules/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.modules</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/BestFitness.html b/doc/jcgp/backend/modules/problem/BestFitness.html
index 9578099..1ac19be 100644
--- a/doc/jcgp/backend/modules/problem/BestFitness.html
+++ b/doc/jcgp/backend/modules/problem/BestFitness.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>BestFitness</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -120,6 +120,17 @@ var activeTableTab = "activeTableTab";
<br>
<pre>public enum <span class="typeNameLabel">BestFitness</span>
extends java.lang.Enum&lt;<a href="../../../../jcgp/backend/modules/problem/BestFitness.html" title="enum in jcgp.backend.modules.problem">BestFitness</a>&gt;</pre>
+<div class="block">Enum type to allow problems to indicate their fitness
+ orientation.
+ <br><br>
+ <code>BestFitness.HIGH</code> means high fitness values are
+ better than low. Conversely, <code>BestFitness.LOW</code>
+ signals that low fitness values indicate better fitness
+ than high values.</div>
+<dl>
+<dt><span class="simpleTagLabel">Author:</span></dt>
+<dd>Eduardo Pedroni</dd>
+</dl>
</li>
</ul>
</div>
diff --git a/doc/jcgp/backend/modules/problem/DigitalCircuitProblem.html b/doc/jcgp/backend/modules/problem/DigitalCircuitProblem.html
index d9d3011..21bdb2b 100644
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+++ b/doc/jcgp/backend/modules/problem/DigitalCircuitProblem.html
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<head>
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+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DigitalCircuitProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -18,7 +18,7 @@
catch(err) {
}
//-->
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+var methods = {"i0":10,"i1":10,"i2":10};
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var altColor = "altColor";
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</tr>
<tr id="i1" class="rowColor">
<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
-<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
- the current best chromosome.</div>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
+<div class="block">Used to assert whether a given population contains a perfect solution
+ to the problem.</div>
</td>
</tr>
<tr id="i2" class="altColor">
@@ -212,20 +212,13 @@ extends <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html"
test cases.</div>
</td>
</tr>
-<tr id="i3" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
-<div class="block">Used to assert whether a given population contains a perfect solution
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-<code><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#addTestCase-java.lang.String:A-java.lang.String:A-">addTestCase</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#clearTestCases--">clearTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#getTestCases--">getTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></code></li>
+<code><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#addTestCase-java.lang.String:A-java.lang.String:A-">addTestCase</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#clearTestCases--">clearTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#getTestCases--">getTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></code></li>
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@@ -338,21 +331,21 @@ extends <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html"
</dl>
</li>
</ul>
-<a name="perfectSolutionFound-jcgp.backend.population.Population-">
+<a name="hasPerfectSolution-jcgp.backend.population.Population-">
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</a>
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+<ul class="blockListLast">
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-<h4>perfectSolutionFound</h4>
-<pre>public&nbsp;int&nbsp;perfectSolutionFound(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">Problem</a></code></span></div>
+<h4>hasPerfectSolution</h4>
+<pre>public&nbsp;int&nbsp;hasPerfectSolution(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">Problem</a></code></span></div>
<div class="block">Used to assert whether a given population contains a perfect solution
to the problem. It is up to the problem to define what qualifies
a perfect solution, as some problems (subject ones such as music and
art evolution, for example) might not have perfect solutions at all.</div>
<dl>
<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
+<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
<dt><span class="paramLabel">Parameters:</span></dt>
<dd><code>population</code> - the population to search through for a perfect chromosome.</dd>
<dt><span class="returnLabel">Returns:</span></dt>
@@ -360,28 +353,6 @@ extends <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html"
</dl>
</li>
</ul>
-<a name="hasImprovement-jcgp.backend.population.Population-">
-<!-- -->
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-<ul class="blockListLast">
-<li class="blockList">
-<h4>hasImprovement</h4>
-<pre>public&nbsp;int&nbsp;hasImprovement(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">Problem</a></code></span></div>
-<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
- the current best chromosome. A typical implementation of this method
- will simply compare chromosome fitness values, though the problem type
- is free to implement this in any way.</div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>population</code> - the population potentially containing a fitter chromosome.</dd>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>the index of the first chromosome in the population that is an improvement, -1 if none is found.</dd>
-</dl>
-</li>
-</ul>
</li>
</ul>
</li>
diff --git a/doc/jcgp/backend/modules/problem/Problem.html b/doc/jcgp/backend/modules/problem/Problem.html
index 0d08b2a..2e43445 100644
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Problem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -212,6 +212,13 @@ extends <a href="../../../../jcgp/backend/modules/Module.html" title="class in j
</td>
</tr>
<tr id="i6" class="altColor">
+<td class="colFirst"><code>abstract int</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
+<div class="block">Used to assert whether a given population contains a perfect solution
+ to the problem.</div>
+</td>
+</tr>
+<tr id="i7" class="rowColor">
<td class="colFirst"><code>abstract void</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/Problem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></span>(java.io.File&nbsp;file,
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@@ -219,13 +226,6 @@ extends <a href="../../../../jcgp/backend/modules/Module.html" title="class in j
set up the problem type instance appropriately.</div>
</td>
</tr>
-<tr id="i7" class="rowColor">
-<td class="colFirst"><code>abstract int</code></td>
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-<div class="block">Used to assert whether a given population contains a perfect solution
- to the problem.</div>
-</td>
-</tr>
<tr id="i8" class="altColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/Problem.html#reset--">reset</a></span>()</code>
@@ -311,13 +311,13 @@ extends <a href="../../../../jcgp/backend/modules/Module.html" title="class in j
</dl>
</li>
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+<h4>hasPerfectSolution</h4>
+<pre>public abstract&nbsp;int&nbsp;hasPerfectSolution(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
<div class="block">Used to assert whether a given population contains a perfect solution
to the problem. It is up to the problem to define what qualifies
a perfect solution, as some problems (subject ones such as music and
diff --git a/doc/jcgp/backend/modules/problem/SymbolicRegressionProblem.html b/doc/jcgp/backend/modules/problem/SymbolicRegressionProblem.html
index 1ab3746..5f9fbd7 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>SymbolicRegressionProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -18,7 +18,7 @@
catch(err) {
}
//-->
-var methods = {"i0":10,"i1":10,"i2":10,"i3":10};
+var methods = {"i0":10,"i1":10,"i2":10};
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var altColor = "altColor";
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</tr>
<tr id="i1" class="rowColor">
<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
-<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
- the current best chromosome.</div>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
+<div class="block">Used to assert whether a given population contains a perfect solution
+ to the problem.</div>
</td>
</tr>
<tr id="i2" class="altColor">
@@ -225,20 +225,13 @@ extends <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html"
test cases.</div>
</td>
</tr>
-<tr id="i3" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
-<div class="block">Used to assert whether a given population contains a perfect solution
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-<code><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#addTestCase-java.lang.String:A-java.lang.String:A-">addTestCase</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#clearTestCases--">clearTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#getTestCases--">getTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></code></li>
+<code><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#addTestCase-java.lang.String:A-java.lang.String:A-">addTestCase</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#clearTestCases--">clearTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#getTestCases--">getTestCases</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a>, <a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></code></li>
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</dl>
</li>
</ul>
-<a name="perfectSolutionFound-jcgp.backend.population.Population-">
+<a name="hasPerfectSolution-jcgp.backend.population.Population-">
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+<ul class="blockListLast">
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-<pre>public&nbsp;int&nbsp;perfectSolutionFound(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">Problem</a></code></span></div>
+<h4>hasPerfectSolution</h4>
+<pre>public&nbsp;int&nbsp;hasPerfectSolution(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">Problem</a></code></span></div>
<div class="block">Used to assert whether a given population contains a perfect solution
to the problem. It is up to the problem to define what qualifies
a perfect solution, as some problems (subject ones such as music and
art evolution, for example) might not have perfect solutions at all.</div>
<dl>
<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
+<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
<dt><span class="paramLabel">Parameters:</span></dt>
<dd><code>population</code> - the population to search through for a perfect chromosome.</dd>
<dt><span class="returnLabel">Returns:</span></dt>
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</dl>
</li>
</ul>
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-<!-- -->
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-<ul class="blockListLast">
-<li class="blockList">
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-<pre>public&nbsp;int&nbsp;hasImprovement(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">Problem</a></code></span></div>
-<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
- the current best chromosome. A typical implementation of this method
- will simply compare chromosome fitness values, though the problem type
- is free to implement this in any way.</div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>population</code> - the population potentially containing a fitter chromosome.</dd>
-<dt><span class="returnLabel">Returns:</span></dt>
-<dd>the index of the first chromosome in the population that is an improvement, -1 if none is found.</dd>
-</dl>
-</li>
-</ul>
</li>
</ul>
</li>
diff --git a/doc/jcgp/backend/modules/problem/TestCaseProblem.TestCase.html b/doc/jcgp/backend/modules/problem/TestCaseProblem.TestCase.html
index 5373cf2..0fc7af7 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>TestCaseProblem.TestCase</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/TestCaseProblem.html b/doc/jcgp/backend/modules/problem/TestCaseProblem.html
index 663bc0a..b0abde9 100644
--- a/doc/jcgp/backend/modules/problem/TestCaseProblem.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>TestCaseProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -18,7 +18,7 @@
catch(err) {
}
//-->
-var methods = {"i0":10,"i1":10,"i2":10,"i3":10};
+var methods = {"i0":10,"i1":10,"i2":10,"i3":10,"i4":10};
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var altColor = "altColor";
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<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#getTestCases--">getTestCases</a></span>()</code>&nbsp;</td>
</tr>
<tr id="i3" class="rowColor">
+<td class="colFirst"><code>int</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
+<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
+ the current best chromosome.</div>
+</td>
+</tr>
+<tr id="i4" class="altColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">parseProblemData</a></span>(java.io.File&nbsp;file,
<a href="../../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a>&nbsp;resources)</code>
@@ -235,7 +242,7 @@ extends <a href="../../../../jcgp/backend/modules/problem/Problem.html" title="c
<!-- -->
</a>
<h3>Methods inherited from class&nbsp;jcgp.backend.modules.problem.<a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></h3>
-<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#evaluate-jcgp.backend.population.Population-jcgp.backend.resources.Resources-">evaluate</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getBestFitness--">getBestFitness</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFileExtension--">getFileExtension</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFitnessOrientation--">getFitnessOrientation</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFunctionSet--">getFunctionSet</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#reset--">reset</a></code></li>
+<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#evaluate-jcgp.backend.population.Population-jcgp.backend.resources.Resources-">evaluate</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getBestFitness--">getBestFitness</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFileExtension--">getFileExtension</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFitnessOrientation--">getFitnessOrientation</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#getFunctionSet--">getFunctionSet</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a>, <a href="../../../../jcgp/backend/modules/problem/Problem.html#reset--">reset</a></code></li>
</ul>
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@@ -331,7 +338,7 @@ extends <a href="../../../../jcgp/backend/modules/problem/Problem.html" title="c
<a name="parseProblemData-java.io.File-jcgp.backend.resources.ModifiableResources-">
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</a>
-<ul class="blockListLast">
+<ul class="blockList">
<li class="blockList">
<h4>parseProblemData</h4>
<pre>public&nbsp;void&nbsp;parseProblemData(java.io.File&nbsp;file,
@@ -354,6 +361,28 @@ extends <a href="../../../../jcgp/backend/modules/problem/Problem.html" title="c
</dl>
</li>
</ul>
+<a name="hasImprovement-jcgp.backend.population.Population-">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>hasImprovement</h4>
+<pre>public&nbsp;int&nbsp;hasImprovement(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">Problem</a></code></span></div>
+<div class="block">Used to assert whether a given population has a chromosome that is an improvement over
+ the current best chromosome. A typical implementation of this method
+ will simply compare chromosome fitness values, though the problem type
+ is free to implement this in any way.</div>
+<dl>
+<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
+<dd><code><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></dd>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>population</code> - the population potentially containing a fitter chromosome.</dd>
+<dt><span class="returnLabel">Returns:</span></dt>
+<dd>the index of the first chromosome in the population that is an improvement, -1 if none is found.</dd>
+</dl>
+</li>
+</ul>
</li>
</ul>
</li>
diff --git a/doc/jcgp/backend/modules/problem/class-use/BestFitness.html b/doc/jcgp/backend/modules/problem/class-use/BestFitness.html
index 3e1aec5..a16f095 100644
--- a/doc/jcgp/backend/modules/problem/class-use/BestFitness.html
+++ b/doc/jcgp/backend/modules/problem/class-use/BestFitness.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.BestFitness</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/class-use/DigitalCircuitProblem.html b/doc/jcgp/backend/modules/problem/class-use/DigitalCircuitProblem.html
index 0a41224..6c55d92 100644
--- a/doc/jcgp/backend/modules/problem/class-use/DigitalCircuitProblem.html
+++ b/doc/jcgp/backend/modules/problem/class-use/DigitalCircuitProblem.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.DigitalCircuitProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/class-use/Problem.html b/doc/jcgp/backend/modules/problem/class-use/Problem.html
index df1956b..b4e6bb4 100644
--- a/doc/jcgp/backend/modules/problem/class-use/Problem.html
+++ b/doc/jcgp/backend/modules/problem/class-use/Problem.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.Problem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
@@ -110,17 +110,8 @@
<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></code></td>
<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getProblem--">getProblem</a></span>()</code>&nbsp;</td>
</tr>
-</tbody>
-</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../../jcgp/package-summary.html">jcgp</a> that return types with arguments of type <a href="../../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>java.util.ArrayList&lt;<a href="../../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>&gt;</code></td>
+<tr class="rowColor">
+<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/problem/Problem.html" title="class in jcgp.backend.modules.problem">Problem</a>[]</code></td>
<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getProblems--">getProblems</a></span>()</code>&nbsp;</td>
</tr>
</tbody>
diff --git a/doc/jcgp/backend/modules/problem/class-use/SymbolicRegressionProblem.html b/doc/jcgp/backend/modules/problem/class-use/SymbolicRegressionProblem.html
index 6347b53..b0d63e1 100644
--- a/doc/jcgp/backend/modules/problem/class-use/SymbolicRegressionProblem.html
+++ b/doc/jcgp/backend/modules/problem/class-use/SymbolicRegressionProblem.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.SymbolicRegressionProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.TestCase.html b/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.TestCase.html
index 51bc5c0..4ce2d5e 100644
--- a/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.TestCase.html
+++ b/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.TestCase.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.TestCaseProblem.TestCase</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.html b/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.html
index 2924adc..116f348 100644
--- a/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.html
+++ b/doc/jcgp/backend/modules/problem/class-use/TestCaseProblem.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.modules.problem.TestCaseProblem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/package-frame.html b/doc/jcgp/backend/modules/problem/package-frame.html
index 7089f7c..f495522 100644
--- a/doc/jcgp/backend/modules/problem/package-frame.html
+++ b/doc/jcgp/backend/modules/problem/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.problem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/package-summary.html b/doc/jcgp/backend/modules/problem/package-summary.html
index 381db7a..4c80838 100644
--- a/doc/jcgp/backend/modules/problem/package-summary.html
+++ b/doc/jcgp/backend/modules/problem/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.problem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -130,7 +130,10 @@
<tbody>
<tr class="altColor">
<td class="colFirst"><a href="../../../../jcgp/backend/modules/problem/BestFitness.html" title="enum in jcgp.backend.modules.problem">BestFitness</a></td>
-<td class="colLast">&nbsp;</td>
+<td class="colLast">
+<div class="block">Enum type to allow problems to indicate their fitness
+ orientation.</div>
+</td>
</tr>
</tbody>
</table>
diff --git a/doc/jcgp/backend/modules/problem/package-tree.html b/doc/jcgp/backend/modules/problem/package-tree.html
index 1ff07b5..0ac74b9 100644
--- a/doc/jcgp/backend/modules/problem/package-tree.html
+++ b/doc/jcgp/backend/modules/problem/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.modules.problem Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/modules/problem/package-use.html b/doc/jcgp/backend/modules/problem/package-use.html
index 32be276..dc54c41 100644
--- a/doc/jcgp/backend/modules/problem/package-use.html
+++ b/doc/jcgp/backend/modules/problem/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.modules.problem</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -140,7 +140,10 @@
</tr>
<tbody>
<tr class="altColor">
-<td class="colOne"><a href="../../../../jcgp/backend/modules/problem/class-use/BestFitness.html#jcgp.backend.modules.problem">BestFitness</a>&nbsp;</td>
+<td class="colOne"><a href="../../../../jcgp/backend/modules/problem/class-use/BestFitness.html#jcgp.backend.modules.problem">BestFitness</a>
+<div class="block">Enum type to allow problems to indicate their fitness
+ orientation.</div>
+</td>
</tr>
<tr class="rowColor">
<td class="colOne"><a href="../../../../jcgp/backend/modules/problem/class-use/Problem.html#jcgp.backend.modules.problem">Problem</a>
@@ -188,7 +191,10 @@
</tr>
<tbody>
<tr class="altColor">
-<td class="colOne"><a href="../../../../jcgp/backend/modules/problem/class-use/BestFitness.html#jcgp.backend.resources">BestFitness</a>&nbsp;</td>
+<td class="colOne"><a href="../../../../jcgp/backend/modules/problem/class-use/BestFitness.html#jcgp.backend.resources">BestFitness</a>
+<div class="block">Enum type to allow problems to indicate their fitness
+ orientation.</div>
+</td>
</tr>
</tbody>
</table>
diff --git a/doc/jcgp/backend/parameters/BooleanParameter.html b/doc/jcgp/backend/parameters/BooleanParameter.html
index 06792b1..9443e96 100644
--- a/doc/jcgp/backend/parameters/BooleanParameter.html
+++ b/doc/jcgp/backend/parameters/BooleanParameter.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>BooleanParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/DoubleParameter.html b/doc/jcgp/backend/parameters/DoubleParameter.html
index eb59a02..ec2fd21 100644
--- a/doc/jcgp/backend/parameters/DoubleParameter.html
+++ b/doc/jcgp/backend/parameters/DoubleParameter.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>DoubleParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/parameters/IntegerParameter.html b/doc/jcgp/backend/parameters/IntegerParameter.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>IntegerParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/parameters/Parameter.html b/doc/jcgp/backend/parameters/Parameter.html
index c616601..5d5b771 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>Parameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/parameters/ParameterStatus.html b/doc/jcgp/backend/parameters/ParameterStatus.html
index fc216df..447b174 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
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<title>ParameterStatus</title>
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+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/backend/parameters/class-use/BooleanParameter.html b/doc/jcgp/backend/parameters/class-use/BooleanParameter.html
index 7f43c20..89c6960 100644
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.BooleanParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/backend/parameters/class-use/DoubleParameter.html b/doc/jcgp/backend/parameters/class-use/DoubleParameter.html
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<!-- NewPage -->
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-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.DoubleParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/class-use/IntegerParameter.html b/doc/jcgp/backend/parameters/class-use/IntegerParameter.html
index 75b6c3f..42208ac 100644
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.IntegerParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/class-use/Parameter.html b/doc/jcgp/backend/parameters/class-use/Parameter.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.Parameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/class-use/ParameterStatus.html b/doc/jcgp/backend/parameters/class-use/ParameterStatus.html
index d0471f9..103bef2 100644
--- a/doc/jcgp/backend/parameters/class-use/ParameterStatus.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.ParameterStatus</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/BooleanMonitor.html b/doc/jcgp/backend/parameters/monitors/BooleanMonitor.html
index 7b20189..d3dfd7a 100644
--- a/doc/jcgp/backend/parameters/monitors/BooleanMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/BooleanMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>BooleanMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/DoubleMonitor.html b/doc/jcgp/backend/parameters/monitors/DoubleMonitor.html
index 6c04a90..70e14e5 100644
--- a/doc/jcgp/backend/parameters/monitors/DoubleMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/DoubleMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>DoubleMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/IntegerMonitor.html b/doc/jcgp/backend/parameters/monitors/IntegerMonitor.html
index 9ebc2d8..0d17efb 100644
--- a/doc/jcgp/backend/parameters/monitors/IntegerMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/IntegerMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>IntegerMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/class-use/BooleanMonitor.html b/doc/jcgp/backend/parameters/monitors/class-use/BooleanMonitor.html
index abda05b..81d6f56 100644
--- a/doc/jcgp/backend/parameters/monitors/class-use/BooleanMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/class-use/BooleanMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.monitors.BooleanMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/class-use/DoubleMonitor.html b/doc/jcgp/backend/parameters/monitors/class-use/DoubleMonitor.html
index 4b51550..01c414a 100644
--- a/doc/jcgp/backend/parameters/monitors/class-use/DoubleMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/class-use/DoubleMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.monitors.DoubleMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/class-use/IntegerMonitor.html b/doc/jcgp/backend/parameters/monitors/class-use/IntegerMonitor.html
index a103997..21ff5a2 100644
--- a/doc/jcgp/backend/parameters/monitors/class-use/IntegerMonitor.html
+++ b/doc/jcgp/backend/parameters/monitors/class-use/IntegerMonitor.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parameters.monitors.IntegerMonitor</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/package-frame.html b/doc/jcgp/backend/parameters/monitors/package-frame.html
index af63177..384c4fd 100644
--- a/doc/jcgp/backend/parameters/monitors/package-frame.html
+++ b/doc/jcgp/backend/parameters/monitors/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters.monitors</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/package-summary.html b/doc/jcgp/backend/parameters/monitors/package-summary.html
index d7b074c..104bdb6 100644
--- a/doc/jcgp/backend/parameters/monitors/package-summary.html
+++ b/doc/jcgp/backend/parameters/monitors/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters.monitors</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/package-tree.html b/doc/jcgp/backend/parameters/monitors/package-tree.html
index 3b96ca8..4a0e5af 100644
--- a/doc/jcgp/backend/parameters/monitors/package-tree.html
+++ b/doc/jcgp/backend/parameters/monitors/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters.monitors Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/monitors/package-use.html b/doc/jcgp/backend/parameters/monitors/package-use.html
index c6ae683..b4191f4 100644
--- a/doc/jcgp/backend/parameters/monitors/package-use.html
+++ b/doc/jcgp/backend/parameters/monitors/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.parameters.monitors</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/package-frame.html b/doc/jcgp/backend/parameters/package-frame.html
index 71d0bf3..7b3befd 100644
--- a/doc/jcgp/backend/parameters/package-frame.html
+++ b/doc/jcgp/backend/parameters/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/package-summary.html b/doc/jcgp/backend/parameters/package-summary.html
index 0942c04..4c0e034 100644
--- a/doc/jcgp/backend/parameters/package-summary.html
+++ b/doc/jcgp/backend/parameters/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/package-tree.html b/doc/jcgp/backend/parameters/package-tree.html
index b82ea62..824d5d5 100644
--- a/doc/jcgp/backend/parameters/package-tree.html
+++ b/doc/jcgp/backend/parameters/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parameters Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parameters/package-use.html b/doc/jcgp/backend/parameters/package-use.html
index d16ea79..10224a4 100644
--- a/doc/jcgp/backend/parameters/package-use.html
+++ b/doc/jcgp/backend/parameters/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/ChromosomeParser.html b/doc/jcgp/backend/parsers/ChromosomeParser.html
index 14862f6..800c572 100644
--- a/doc/jcgp/backend/parsers/ChromosomeParser.html
+++ b/doc/jcgp/backend/parsers/ChromosomeParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>ChromosomeParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
@@ -18,7 +18,7 @@
catch(err) {
}
//-->
-var methods = {"i0":9,"i1":9};
+var methods = {"i0":9,"i1":9,"i2":9};
var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]};
var altColor = "altColor";
var rowColor = "rowColor";
@@ -162,6 +162,13 @@ extends java.lang.Object</pre>
</tr>
<tr id="i1" class="rowColor">
<td class="colFirst"><code>static void</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">print</a></span>(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
+ <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
+<div class="block">Writes a chromosome to the console in .chr format.</div>
+</td>
+</tr>
+<tr id="i2" class="altColor">
+<td class="colFirst"><code>static void</code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File&nbsp;file,
<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
<a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
@@ -224,16 +231,16 @@ extends java.lang.Object</pre>
by CGP.</div>
<dl>
<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>file</code> - the .chr file to parse from</dd>
-<dd><code>chromosome</code> - the chromosome to configure</dd>
-<dd><code>resources</code> - the experiment resources</dd>
+<dd><code>file</code> - the .chr file to parse from.</dd>
+<dd><code>chromosome</code> - the chromosome to configure.</dd>
+<dd><code>resources</code> - the experiment resources.</dd>
</dl>
</li>
</ul>
<a name="save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">
<!-- -->
</a>
-<ul class="blockListLast">
+<ul class="blockList">
<li class="blockList">
<h4>save</h4>
<pre>public static&nbsp;void&nbsp;save(java.io.File&nbsp;file,
@@ -245,8 +252,26 @@ extends java.lang.Object</pre>
be read by the original CGP implementation.</div>
<dl>
<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>file</code> - the file to write to</dd>
-<dd><code>chromosome</code> - the chromosome to save</dd>
+<dd><code>file</code> - the file to write to.</dd>
+<dd><code>chromosome</code> - the chromosome to save.</dd>
+<dd><code>resources</code> - a reference to the experiment's resources.</dd>
+</dl>
+</li>
+</ul>
+<a name="print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>print</h4>
+<pre>public static&nbsp;void&nbsp;print(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
+ <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</pre>
+<div class="block">Writes a chromosome to the console in .chr format. Note
+ that, if using a GUI console, that console must be flushed for the
+ output to appear.</div>
+<dl>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>chromosome</code> - the chromosome to save.</dd>
<dd><code>resources</code> - a reference to the experiment's resources.</dd>
</dl>
</li>
diff --git a/doc/jcgp/backend/parsers/FunctionParser.html b/doc/jcgp/backend/parsers/FunctionParser.html
index f7ef21c..09b6e9a 100644
--- a/doc/jcgp/backend/parsers/FunctionParser.html
+++ b/doc/jcgp/backend/parsers/FunctionParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>FunctionParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/ParameterParser.html b/doc/jcgp/backend/parsers/ParameterParser.html
index 3dd7c2d..29595a2 100644
--- a/doc/jcgp/backend/parsers/ParameterParser.html
+++ b/doc/jcgp/backend/parsers/ParameterParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>ParameterParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/TestCaseParser.html b/doc/jcgp/backend/parsers/TestCaseParser.html
index e3dc642..a8f6fd0 100644
--- a/doc/jcgp/backend/parsers/TestCaseParser.html
+++ b/doc/jcgp/backend/parsers/TestCaseParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>TestCaseParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html b/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html
index e75e1c7..ae89261 100644
--- a/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html
+++ b/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parsers.ChromosomeParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/class-use/FunctionParser.html b/doc/jcgp/backend/parsers/class-use/FunctionParser.html
index ae142f1..249c900 100644
--- a/doc/jcgp/backend/parsers/class-use/FunctionParser.html
+++ b/doc/jcgp/backend/parsers/class-use/FunctionParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parsers.FunctionParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/class-use/ParameterParser.html b/doc/jcgp/backend/parsers/class-use/ParameterParser.html
index 25ee51d..5961ef3 100644
--- a/doc/jcgp/backend/parsers/class-use/ParameterParser.html
+++ b/doc/jcgp/backend/parsers/class-use/ParameterParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parsers.ParameterParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/class-use/TestCaseParser.html b/doc/jcgp/backend/parsers/class-use/TestCaseParser.html
index 6a6fd9e..d23f7bf 100644
--- a/doc/jcgp/backend/parsers/class-use/TestCaseParser.html
+++ b/doc/jcgp/backend/parsers/class-use/TestCaseParser.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.parsers.TestCaseParser</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/package-frame.html b/doc/jcgp/backend/parsers/package-frame.html
index 6465787..e8fe744 100644
--- a/doc/jcgp/backend/parsers/package-frame.html
+++ b/doc/jcgp/backend/parsers/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parsers</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/package-summary.html b/doc/jcgp/backend/parsers/package-summary.html
index bce0483..f2140fc 100644
--- a/doc/jcgp/backend/parsers/package-summary.html
+++ b/doc/jcgp/backend/parsers/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parsers</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/package-tree.html b/doc/jcgp/backend/parsers/package-tree.html
index 0f41a20..beac62a 100644
--- a/doc/jcgp/backend/parsers/package-tree.html
+++ b/doc/jcgp/backend/parsers/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.parsers Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/parsers/package-use.html b/doc/jcgp/backend/parsers/package-use.html
index f58b655..36a0dd8 100644
--- a/doc/jcgp/backend/parsers/package-use.html
+++ b/doc/jcgp/backend/parsers/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.parsers</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Chromosome.html b/doc/jcgp/backend/population/Chromosome.html
index 75ec3c1..c047c4d 100644
--- a/doc/jcgp/backend/population/Chromosome.html
+++ b/doc/jcgp/backend/population/Chromosome.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Chromosome</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Connection.html b/doc/jcgp/backend/population/Connection.html
index b7b5c07..3a76f23 100644
--- a/doc/jcgp/backend/population/Connection.html
+++ b/doc/jcgp/backend/population/Connection.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Connection</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Input.html b/doc/jcgp/backend/population/Input.html
index f78663e..a535ebc 100644
--- a/doc/jcgp/backend/population/Input.html
+++ b/doc/jcgp/backend/population/Input.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Input</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Mutable.html b/doc/jcgp/backend/population/Mutable.html
new file mode 100644
index 0000000..4ef59eb
--- /dev/null
+++ b/doc/jcgp/backend/population/Mutable.html
@@ -0,0 +1,306 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
+<!-- NewPage -->
+<html lang="en">
+<head>
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
+<title>Mutable</title>
+<meta name="date" content="2014-05-12">
+<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
+<script type="text/javascript" src="../../../script.js"></script>
+</head>
+<body>
+<script type="text/javascript"><!--
+ try {
+ if (location.href.indexOf('is-external=true') == -1) {
+ parent.document.title="Mutable";
+ }
+ }
+ catch(err) {
+ }
+//-->
+var methods = {"i0":6,"i1":6};
+var tabs = {65535:["t0","All Methods"],2:["t2","Instance Methods"],4:["t3","Abstract Methods"]};
+var altColor = "altColor";
+var rowColor = "rowColor";
+var tableTab = "tableTab";
+var activeTableTab = "activeTableTab";
+</script>
+<noscript>
+<div>JavaScript is disabled on your browser.</div>
+</noscript>
+<!-- ========= START OF TOP NAVBAR ======= -->
+<div class="topNav"><a name="navbar.top">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.top.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../overview-summary.html">Overview</a></li>
+<li><a href="package-summary.html">Package</a></li>
+<li class="navBarCell1Rev">Class</li>
+<li><a href="class-use/Mutable.html">Use</a></li>
+<li><a href="package-tree.html">Tree</a></li>
+<li><a href="../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li><a href="../../../jcgp/backend/population/Input.html" title="class in jcgp.backend.population"><span class="typeNameLink">Prev&nbsp;Class</span></a></li>
+<li><a href="../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population"><span class="typeNameLink">Next&nbsp;Class</span></a></li>
+</ul>
+<ul class="navList">
+<li><a href="../../../index.html?jcgp/backend/population/Mutable.html" target="_top">Frames</a></li>
+<li><a href="Mutable.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_top">
+<li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_top");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<div>
+<ul class="subNavList">
+<li>Summary:&nbsp;</li>
+<li>Nested&nbsp;|&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li>Constr&nbsp;|&nbsp;</li>
+<li><a href="#method.summary">Method</a></li>
+</ul>
+<ul class="subNavList">
+<li>Detail:&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li>Constr&nbsp;|&nbsp;</li>
+<li><a href="#method.detail">Method</a></li>
+</ul>
+</div>
+<a name="skip.navbar.top">
+<!-- -->
+</a></div>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<!-- ======== START OF CLASS DATA ======== -->
+<div class="header">
+<div class="subTitle">jcgp.backend.population</div>
+<h2 title="Interface Mutable" class="title">Interface Mutable</h2>
+</div>
+<div class="contentContainer">
+<div class="description">
+<ul class="blockList">
+<li class="blockList">
+<dl>
+<dt>All Known Implementing Classes:</dt>
+<dd><a href="../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a>, <a href="../../../jcgp/backend/population/Output.html" title="class in jcgp.backend.population">Output</a></dd>
+</dl>
+<hr>
+<br>
+<pre>public interface <span class="typeNameLabel">Mutable</span></pre>
+<div class="block"><code>Mutable</code> declares the expected behaviour of any
+ part of a chromosome that is mutable, more specifically
+ nodes or outputs. Inputs are not mutable since they don't have
+ connections or functions.
+ <br><br>
+ This interface provides a way to deal with mutable elements
+ generically without having to specify whether they are nodes
+ or outputs. In this way a random mutable element can be picked and
+ dealt with more easily, facilitating mutations.</div>
+<dl>
+<dt><span class="simpleTagLabel">Author:</span></dt>
+<dd>Eduardo Pedroni</dd>
+</dl>
+</li>
+</ul>
+</div>
+<div class="summary">
+<ul class="blockList">
+<li class="blockList">
+<!-- ========== METHOD SUMMARY =========== -->
+<ul class="blockList">
+<li class="blockList"><a name="method.summary">
+<!-- -->
+</a>
+<h3>Method Summary</h3>
+<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation">
+<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t3" class="tableTab"><span><a href="javascript:show(4);">Abstract Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tr id="i0" class="altColor">
+<td class="colFirst"><code>boolean</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Mutable.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></span>(<a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;element)</code>
+<div class="block">Asserts if the specified element is a copy of the elements
+ this is called on.<br>
+ This method returns true if and only if:
+
+ the elements being compared are not the same instance;
+ the connections of the compared elements are not the same instance;
+ the elements have the same function (in the case of Node);
+ the grid position of the elements themselves are the same;
+ the grid position of all equivalent connections are the same;
+
+ <br><br>
+ The relationship computed by this method is:
+
+ symmetric: a.copyOf(b) == b.copyOf(a);
+ not reflexive: a.copyOf(a) returns false;
+ not transitive: if a.copyOf(b) is true and b.copyOf(c) is true, a.copyOf(c) is
+ not necessarily true since it is possible that a == c.
+ </div>
+</td>
+</tr>
+<tr id="i1" class="rowColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/population/Mutable.html#setConnection-int-jcgp.backend.population.Connection-">setConnection</a></span>(int&nbsp;index,
+ <a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</code>
+<div class="block">This method sets the indexed connection to the specified new connection.</div>
+</td>
+</tr>
+</table>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+<div class="details">
+<ul class="blockList">
+<li class="blockList">
+<!-- ============ METHOD DETAIL ========== -->
+<ul class="blockList">
+<li class="blockList"><a name="method.detail">
+<!-- -->
+</a>
+<h3>Method Detail</h3>
+<a name="setConnection-int-jcgp.backend.population.Connection-">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>setConnection</h4>
+<pre>void&nbsp;setConnection(int&nbsp;index,
+ <a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</pre>
+<div class="block">This method sets the indexed connection to the specified new connection.
+ Implementing classes may choose to ignore the given index (such as in the
+ case of outputs, which only have one connection).</div>
+<dl>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>index</code> - the connection index to set.</dd>
+<dd><code>newConnection</code> - the chromosome element to connect to.</dd>
+</dl>
+</li>
+</ul>
+<a name="copyOf-jcgp.backend.population.Mutable-">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>copyOf</h4>
+<pre>boolean&nbsp;copyOf(<a href="../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;element)</pre>
+<div class="block">Asserts if the specified element is a copy of the elements
+ this is called on.<br>
+ This method returns true if and only if:
+ <ul>
+ <li>the elements being compared are not the same instance;</li>
+ <li>the connections of the compared elements are not the same instance;</li>
+ <li>the elements have the same function (in the case of Node);</li>
+ <li>the grid position of the elements themselves are the same;</li>
+ <li>the grid position of all equivalent connections are the same;</li>
+ </ul>
+ <br><br>
+ The relationship computed by this method is:
+ <ul>
+ <li>symmetric: a.copyOf(b) == b.copyOf(a);</li>
+ <li>not reflexive: a.copyOf(a) returns false;</li>
+ <li>not transitive: if a.copyOf(b) is true and b.copyOf(c) is true, a.copyOf(c) is
+ not necessarily true since it is possible that a == c.</li>
+ </ul></div>
+<dl>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>element</code> - the mutable element to compare to.</dd>
+<dt><span class="returnLabel">Returns:</span></dt>
+<dd>true if <code>element</code> is a copy of this element.</dd>
+</dl>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+</div>
+<!-- ========= END OF CLASS DATA ========= -->
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<div class="bottomNav"><a name="navbar.bottom">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.bottom.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../overview-summary.html">Overview</a></li>
+<li><a href="package-summary.html">Package</a></li>
+<li class="navBarCell1Rev">Class</li>
+<li><a href="class-use/Mutable.html">Use</a></li>
+<li><a href="package-tree.html">Tree</a></li>
+<li><a href="../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li><a href="../../../jcgp/backend/population/Input.html" title="class in jcgp.backend.population"><span class="typeNameLink">Prev&nbsp;Class</span></a></li>
+<li><a href="../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population"><span class="typeNameLink">Next&nbsp;Class</span></a></li>
+</ul>
+<ul class="navList">
+<li><a href="../../../index.html?jcgp/backend/population/Mutable.html" target="_top">Frames</a></li>
+<li><a href="Mutable.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_bottom">
+<li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_bottom");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<div>
+<ul class="subNavList">
+<li>Summary:&nbsp;</li>
+<li>Nested&nbsp;|&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li>Constr&nbsp;|&nbsp;</li>
+<li><a href="#method.summary">Method</a></li>
+</ul>
+<ul class="subNavList">
+<li>Detail:&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li>Constr&nbsp;|&nbsp;</li>
+<li><a href="#method.detail">Method</a></li>
+</ul>
+</div>
+<a name="skip.navbar.bottom">
+<!-- -->
+</a></div>
+<!-- ======== END OF BOTTOM NAVBAR ======= -->
+</body>
+</html>
diff --git a/doc/jcgp/backend/population/Node.html b/doc/jcgp/backend/population/Node.html
index ccd543a..d79d08c 100644
--- a/doc/jcgp/backend/population/Node.html
+++ b/doc/jcgp/backend/population/Node.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Node</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Output.html b/doc/jcgp/backend/population/Output.html
index 899b5d1..912b2bb 100644
--- a/doc/jcgp/backend/population/Output.html
+++ b/doc/jcgp/backend/population/Output.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Output</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/Population.html b/doc/jcgp/backend/population/Population.html
index b28fd28..902847b 100644
--- a/doc/jcgp/backend/population/Population.html
+++ b/doc/jcgp/backend/population/Population.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/class-use/Chromosome.html b/doc/jcgp/backend/population/class-use/Chromosome.html
index 4245432..934c1e4 100644
--- a/doc/jcgp/backend/population/class-use/Chromosome.html
+++ b/doc/jcgp/backend/population/class-use/Chromosome.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.population.Chromosome</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -153,6 +153,13 @@
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static void</code></td>
+<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">print</a></span>(<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
+ <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
+<div class="block">Writes a chromosome to the console in .chr format.</div>
+</td>
+</tr>
+<tr class="altColor">
+<td class="colFirst"><code>static void</code></td>
<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File&nbsp;file,
<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
diff --git a/doc/jcgp/backend/population/class-use/Connection.html b/doc/jcgp/backend/population/class-use/Connection.html
index ab91d1e..ef3fb49 100644
--- a/doc/jcgp/backend/population/class-use/Connection.html
+++ b/doc/jcgp/backend/population/class-use/Connection.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Interface jcgp.backend.population.Connection</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -174,18 +174,18 @@
</tr>
<tr class="altColor">
<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">Output.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Output.html#setConnection-int-jcgp.backend.population.Connection-">setConnection</a></span>(int&nbsp;index,
+<td class="colLast"><span class="typeNameLabel">Mutable.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Mutable.html#setConnection-int-jcgp.backend.population.Connection-">setConnection</a></span>(int&nbsp;index,
<a href="../../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</code>
-<div class="block">When mutating an output, the index parameter
- is simply ignored and the output source is
- set.</div>
+<div class="block">This method sets the indexed connection to the specified new connection.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">Mutable.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Mutable.html#setConnection-int-jcgp.backend.population.Connection-">setConnection</a></span>(int&nbsp;index,
+<td class="colLast"><span class="typeNameLabel">Output.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Output.html#setConnection-int-jcgp.backend.population.Connection-">setConnection</a></span>(int&nbsp;index,
<a href="../../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</code>
-<div class="block">This method sets the indexed connection to the specified new connection.</div>
+<div class="block">When mutating an output, the index parameter
+ is simply ignored and the output source is
+ set.</div>
</td>
</tr>
</tbody>
diff --git a/doc/jcgp/backend/population/class-use/Input.html b/doc/jcgp/backend/population/class-use/Input.html
index 61c38ce..95aa7f2 100644
--- a/doc/jcgp/backend/population/class-use/Input.html
+++ b/doc/jcgp/backend/population/class-use/Input.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.population.Input</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/class-use/Mutable.html b/doc/jcgp/backend/population/class-use/Mutable.html
new file mode 100644
index 0000000..bfa8719
--- /dev/null
+++ b/doc/jcgp/backend/population/class-use/Mutable.html
@@ -0,0 +1,228 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
+<!-- NewPage -->
+<html lang="en">
+<head>
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
+<title>Uses of Interface jcgp.backend.population.Mutable</title>
+<meta name="date" content="2014-05-12">
+<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
+<script type="text/javascript" src="../../../../script.js"></script>
+</head>
+<body>
+<script type="text/javascript"><!--
+ try {
+ if (location.href.indexOf('is-external=true') == -1) {
+ parent.document.title="Uses of Interface jcgp.backend.population.Mutable";
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+ }
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+<li><a href="../../../../overview-summary.html">Overview</a></li>
+<li><a href="../package-summary.html">Package</a></li>
+<li><a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Class</a></li>
+<li class="navBarCell1Rev">Use</li>
+<li><a href="../package-tree.html">Tree</a></li>
+<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../../index-files/index-1.html">Index</a></li>
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+</ul>
+</div>
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+<ul class="navList">
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+<li><a href="Mutable.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_top">
+<li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
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+ allClassesLink = document.getElementById("allclasses_navbar_top");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
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+<!-- -->
+</a></div>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<div class="header">
+<h2 title="Uses of Interface jcgp.backend.population.Mutable" class="title">Uses of Interface<br>jcgp.backend.population.Mutable</h2>
+</div>
+<div class="classUseContainer">
+<ul class="blockList">
+<li class="blockList">
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
+<caption><span>Packages that use <a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></span><span class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Package</th>
+<th class="colLast" scope="col">Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><a href="#jcgp.backend.population">jcgp.backend.population</a></td>
+<td class="colLast">&nbsp;</td>
+</tr>
+</tbody>
+</table>
+</li>
+<li class="blockList">
+<ul class="blockList">
+<li class="blockList"><a name="jcgp.backend.population">
+<!-- -->
+</a>
+<h3>Uses of <a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a> in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a></h3>
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing classes, and an explanation">
+<caption><span>Classes in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a> that implement <a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></span><span class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Class and Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code>class&nbsp;</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a></span></code>
+<div class="block">Nodes make up the main part of the chromosome,
+ where the actual functions are evolved.</div>
+</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>class&nbsp;</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Output.html" title="class in jcgp.backend.population">Output</a></span></code>
+<div class="block">This is a chromosome output.</div>
+</td>
+</tr>
+</tbody>
+</table>
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
+<caption><span>Methods in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a> that return <a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></span><span class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code><a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></code></td>
+<td class="colLast"><span class="typeNameLabel">Chromosome.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Chromosome.html#getRandomMutable--">getRandomMutable</a></span>()</code>
+<div class="block">This method is useful for mutating chromosomes.</div>
+</td>
+</tr>
+</tbody>
+</table>
+<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
+<caption><span>Methods in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a> with parameters of type <a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a></span><span class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tbody>
+<tr class="altColor">
+<td class="colFirst"><code>boolean</code></td>
+<td class="colLast"><span class="typeNameLabel">Node.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Node.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></span>(<a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;element)</code>&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>boolean</code></td>
+<td class="colLast"><span class="typeNameLabel">Mutable.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Mutable.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></span>(<a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;element)</code>
+<div class="block">Asserts if the specified element is a copy of the elements
+ this is called on.<br>
+ This method returns true if and only if:
+
+ the elements being compared are not the same instance;
+ the connections of the compared elements are not the same instance;
+ the elements have the same function (in the case of Node);
+ the grid position of the elements themselves are the same;
+ the grid position of all equivalent connections are the same;
+
+ <br><br>
+ The relationship computed by this method is:
+
+ symmetric: a.copyOf(b) == b.copyOf(a);
+ not reflexive: a.copyOf(a) returns false;
+ not transitive: if a.copyOf(b) is true and b.copyOf(c) is true, a.copyOf(c) is
+ not necessarily true since it is possible that a == c.
+ </div>
+</td>
+</tr>
+<tr class="altColor">
+<td class="colFirst"><code>boolean</code></td>
+<td class="colLast"><span class="typeNameLabel">Output.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Output.html#copyOf-jcgp.backend.population.Mutable-">copyOf</a></span>(<a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Mutable</a>&nbsp;m)</code>&nbsp;</td>
+</tr>
+</tbody>
+</table>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<div class="bottomNav"><a name="navbar.bottom">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.bottom.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../../overview-summary.html">Overview</a></li>
+<li><a href="../package-summary.html">Package</a></li>
+<li><a href="../../../../jcgp/backend/population/Mutable.html" title="interface in jcgp.backend.population">Class</a></li>
+<li class="navBarCell1Rev">Use</li>
+<li><a href="../package-tree.html">Tree</a></li>
+<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li>Prev</li>
+<li>Next</li>
+</ul>
+<ul class="navList">
+<li><a href="../../../../index.html?jcgp/backend/population/class-use/Mutable.html" target="_top">Frames</a></li>
+<li><a href="Mutable.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_bottom">
+<li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_bottom");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<a name="skip.navbar.bottom">
+<!-- -->
+</a></div>
+<!-- ======== END OF BOTTOM NAVBAR ======= -->
+</body>
+</html>
diff --git a/doc/jcgp/backend/population/class-use/Node.html b/doc/jcgp/backend/population/class-use/Node.html
index 6dd76ee..6c7f8af 100644
--- a/doc/jcgp/backend/population/class-use/Node.html
+++ b/doc/jcgp/backend/population/class-use/Node.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.population.Node</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/class-use/Output.html b/doc/jcgp/backend/population/class-use/Output.html
index 19bd12a..f5ac04b 100644
--- a/doc/jcgp/backend/population/class-use/Output.html
+++ b/doc/jcgp/backend/population/class-use/Output.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.population.Output</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/class-use/Population.html b/doc/jcgp/backend/population/class-use/Population.html
index d98d156..befa15f 100644
--- a/doc/jcgp/backend/population/class-use/Population.html
+++ b/doc/jcgp/backend/population/class-use/Population.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.population.Population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -179,7 +179,7 @@
</tr>
<tr class="rowColor">
<td class="colFirst"><code>int</code></td>
-<td class="colLast"><span class="typeNameLabel">SymbolicRegressionProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
+<td class="colLast"><span class="typeNameLabel">TestCaseProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/TestCaseProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>abstract int</code></td>
@@ -190,22 +190,18 @@
</tr>
<tr class="rowColor">
<td class="colFirst"><code>int</code></td>
-<td class="colLast"><span class="typeNameLabel">DigitalCircuitProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasImprovement-jcgp.backend.population.Population-">hasImprovement</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
+<td class="colLast"><span class="typeNameLabel">SymbolicRegressionProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
</tr>
<tr class="altColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><span class="typeNameLabel">SymbolicRegressionProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/SymbolicRegressionProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
<td class="colFirst"><code>abstract int</code></td>
-<td class="colLast"><span class="typeNameLabel">Problem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/Problem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
+<td class="colLast"><span class="typeNameLabel">Problem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/Problem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>
<div class="block">Used to assert whether a given population contains a perfect solution
to the problem.</div>
</td>
</tr>
-<tr class="altColor">
+<tr class="rowColor">
<td class="colFirst"><code>int</code></td>
-<td class="colLast"><span class="typeNameLabel">DigitalCircuitProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#perfectSolutionFound-jcgp.backend.population.Population-">perfectSolutionFound</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
+<td class="colLast"><span class="typeNameLabel">DigitalCircuitProblem.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#hasPerfectSolution-jcgp.backend.population.Population-">hasPerfectSolution</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population)</code>&nbsp;</td>
</tr>
</tbody>
</table>
diff --git a/doc/jcgp/backend/population/package-frame.html b/doc/jcgp/backend/population/package-frame.html
index a4febde..9279d91 100644
--- a/doc/jcgp/backend/population/package-frame.html
+++ b/doc/jcgp/backend/population/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/package-summary.html b/doc/jcgp/backend/population/package-summary.html
index c3ab625..738003f 100644
--- a/doc/jcgp/backend/population/package-summary.html
+++ b/doc/jcgp/backend/population/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/package-tree.html b/doc/jcgp/backend/population/package-tree.html
index ff3e02f..77b0330 100644
--- a/doc/jcgp/backend/population/package-tree.html
+++ b/doc/jcgp/backend/population/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.population Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/population/package-use.html b/doc/jcgp/backend/population/package-use.html
index 871296d..352a3cf 100644
--- a/doc/jcgp/backend/population/package-use.html
+++ b/doc/jcgp/backend/population/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/Console.html b/doc/jcgp/backend/resources/Console.html
index e920f61..6906fa1 100644
--- a/doc/jcgp/backend/resources/Console.html
+++ b/doc/jcgp/backend/resources/Console.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Console</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
@@ -101,7 +101,7 @@ var activeTableTab = "activeTableTab";
<li class="blockList">
<dl>
<dt>All Known Implementing Classes:</dt>
-<dd><a href="../../../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></dd>
+<dd><a href="../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></dd>
</dl>
<hr>
<br>
diff --git a/doc/jcgp/backend/resources/ModifiableResources.html b/doc/jcgp/backend/resources/ModifiableResources.html
index c0295f3..b006072 100644
--- a/doc/jcgp/backend/resources/ModifiableResources.html
+++ b/doc/jcgp/backend/resources/ModifiableResources.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>ModifiableResources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/Resources.html b/doc/jcgp/backend/resources/Resources.html
index 0f7e40a..2cde4a4 100644
--- a/doc/jcgp/backend/resources/Resources.html
+++ b/doc/jcgp/backend/resources/Resources.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>Resources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/class-use/Console.html b/doc/jcgp/backend/resources/class-use/Console.html
index ec17f31..06d64ad 100644
--- a/doc/jcgp/backend/resources/class-use/Console.html
+++ b/doc/jcgp/backend/resources/class-use/Console.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Interface jcgp.backend.resources.Console</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -152,7 +152,7 @@
<tbody>
<tr class="altColor">
<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></span></code>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></span></code>
<div class="block">Console pane used by the GUI to display CGP output messages.</div>
</td>
</tr>
diff --git a/doc/jcgp/backend/resources/class-use/ModifiableResources.html b/doc/jcgp/backend/resources/class-use/ModifiableResources.html
index e2cdfe5..f518393 100644
--- a/doc/jcgp/backend/resources/class-use/ModifiableResources.html
+++ b/doc/jcgp/backend/resources/class-use/ModifiableResources.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.resources.ModifiableResources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/class-use/Resources.html b/doc/jcgp/backend/resources/class-use/Resources.html
index 823711d..dfcc5a9 100644
--- a/doc/jcgp/backend/resources/class-use/Resources.html
+++ b/doc/jcgp/backend/resources/class-use/Resources.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.resources.Resources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
@@ -252,6 +252,13 @@
</tr>
<tr class="altColor">
<td class="colFirst"><code>static void</code></td>
+<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">print</a></span>(<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
+ <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
+<div class="block">Writes a chromosome to the console in .chr format.</div>
+</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>static void</code></td>
<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File&nbsp;file,
<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
diff --git a/doc/jcgp/backend/resources/package-frame.html b/doc/jcgp/backend/resources/package-frame.html
index 7ebf77e..487df0f 100644
--- a/doc/jcgp/backend/resources/package-frame.html
+++ b/doc/jcgp/backend/resources/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.resources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/package-summary.html b/doc/jcgp/backend/resources/package-summary.html
index baef3b5..6b13f6d 100644
--- a/doc/jcgp/backend/resources/package-summary.html
+++ b/doc/jcgp/backend/resources/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.resources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/package-tree.html b/doc/jcgp/backend/resources/package-tree.html
index c3efe01..8e27903 100644
--- a/doc/jcgp/backend/resources/package-tree.html
+++ b/doc/jcgp/backend/resources/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.resources Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/resources/package-use.html b/doc/jcgp/backend/resources/package-use.html
index f9efaf7..f0b609e 100644
--- a/doc/jcgp/backend/resources/package-use.html
+++ b/doc/jcgp/backend/resources/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.resources</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/RunEntry.html b/doc/jcgp/backend/statistics/RunEntry.html
index 102e331..43ecadd 100644
--- a/doc/jcgp/backend/statistics/RunEntry.html
+++ b/doc/jcgp/backend/statistics/RunEntry.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>RunEntry</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/StatisticsLogger.html b/doc/jcgp/backend/statistics/StatisticsLogger.html
index 4c80b52..737f6b5 100644
--- a/doc/jcgp/backend/statistics/StatisticsLogger.html
+++ b/doc/jcgp/backend/statistics/StatisticsLogger.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>StatisticsLogger</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/class-use/RunEntry.html b/doc/jcgp/backend/statistics/class-use/RunEntry.html
index 4aefb02..61d5678 100644
--- a/doc/jcgp/backend/statistics/class-use/RunEntry.html
+++ b/doc/jcgp/backend/statistics/class-use/RunEntry.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.statistics.RunEntry</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/class-use/StatisticsLogger.html b/doc/jcgp/backend/statistics/class-use/StatisticsLogger.html
index b441141..2cc8d1e 100644
--- a/doc/jcgp/backend/statistics/class-use/StatisticsLogger.html
+++ b/doc/jcgp/backend/statistics/class-use/StatisticsLogger.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.backend.statistics.StatisticsLogger</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/package-frame.html b/doc/jcgp/backend/statistics/package-frame.html
index 1bcde50..b8c68fb 100644
--- a/doc/jcgp/backend/statistics/package-frame.html
+++ b/doc/jcgp/backend/statistics/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.statistics</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/package-summary.html b/doc/jcgp/backend/statistics/package-summary.html
index 55579f8..1dda371 100644
--- a/doc/jcgp/backend/statistics/package-summary.html
+++ b/doc/jcgp/backend/statistics/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.statistics</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/package-tree.html b/doc/jcgp/backend/statistics/package-tree.html
index 1317c96..d594f11 100644
--- a/doc/jcgp/backend/statistics/package-tree.html
+++ b/doc/jcgp/backend/statistics/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.backend.statistics Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/backend/statistics/package-use.html b/doc/jcgp/backend/statistics/package-use.html
index 26ece29..405e87a 100644
--- a/doc/jcgp/backend/statistics/package-use.html
+++ b/doc/jcgp/backend/statistics/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.backend.statistics</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/class-use/JCGP.html b/doc/jcgp/class-use/JCGP.html
index 7282836..b543dd1 100644
--- a/doc/jcgp/class-use/JCGP.html
+++ b/doc/jcgp/class-use/JCGP.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.JCGP</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/GUI.html b/doc/jcgp/gui/GUI.html
index 8b879fa..73bbe2a 100644
--- a/doc/jcgp/gui/GUI.html
+++ b/doc/jcgp/gui/GUI.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>GUI</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
@@ -116,7 +116,15 @@ var activeTableTab = "activeTableTab";
<br>
<pre>public class <span class="typeNameLabel">GUI</span>
extends javafx.application.Application</pre>
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).
+ <br><br>
+ This class declares the main method used when running the GUI.
+ In addition, all main GUI panes are declared and instantiated here.
+ <br><br>
+ The user interface is divided into 3 main components: the node grid
+ (<a href="../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population"><code>PopulationPane</code></a>), the control pane (<a href="../../jcgp/gui/settings/SettingsPane.html" title="class in jcgp.gui.settings"><code>SettingsPane</code></a>) and
+ the console (<a href="../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console"><code>ConsolePane</code></a>). Click on any of the links in
+ brackets to see more information about each interface component.</div>
<dl>
<dt><span class="simpleTagLabel">Author:</span></dt>
<dd>Eduardo Pedroni</dd>
diff --git a/doc/jcgp/gui/class-use/GUI.html b/doc/jcgp/gui/class-use/GUI.html
index 4f8dc98..815fc1b 100644
--- a/doc/jcgp/gui/class-use/GUI.html
+++ b/doc/jcgp/gui/class-use/GUI.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.GUI</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/console/ConsolePane.html b/doc/jcgp/gui/console/ConsolePane.html
new file mode 100644
index 0000000..8690aec
--- /dev/null
+++ b/doc/jcgp/gui/console/ConsolePane.html
@@ -0,0 +1,458 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
+<!-- NewPage -->
+<html lang="en">
+<head>
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
+<title>ConsolePane</title>
+<meta name="date" content="2014-05-12">
+<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
+<script type="text/javascript" src="../../../script.js"></script>
+</head>
+<body>
+<script type="text/javascript"><!--
+ try {
+ if (location.href.indexOf('is-external=true') == -1) {
+ parent.document.title="ConsolePane";
+ }
+ }
+ catch(err) {
+ }
+//-->
+var methods = {"i0":10,"i1":10,"i2":10};
+var tabs = {65535:["t0","All Methods"],2:["t2","Instance Methods"],8:["t4","Concrete Methods"]};
+var altColor = "altColor";
+var rowColor = "rowColor";
+var tableTab = "tableTab";
+var activeTableTab = "activeTableTab";
+</script>
+<noscript>
+<div>JavaScript is disabled on your browser.</div>
+</noscript>
+<!-- ========= START OF TOP NAVBAR ======= -->
+<div class="topNav"><a name="navbar.top">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.top.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../overview-summary.html">Overview</a></li>
+<li><a href="package-summary.html">Package</a></li>
+<li class="navBarCell1Rev">Class</li>
+<li><a href="class-use/ConsolePane.html">Use</a></li>
+<li><a href="package-tree.html">Tree</a></li>
+<li><a href="../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li>Prev&nbsp;Class</li>
+<li>Next&nbsp;Class</li>
+</ul>
+<ul class="navList">
+<li><a href="../../../index.html?jcgp/gui/console/ConsolePane.html" target="_top">Frames</a></li>
+<li><a href="ConsolePane.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_top">
+<li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_top");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<div>
+<ul class="subNavList">
+<li>Summary:&nbsp;</li>
+<li>Nested&nbsp;|&nbsp;</li>
+<li><a href="#fields.inherited.from.class.javafx.scene.layout.Region">Field</a>&nbsp;|&nbsp;</li>
+<li><a href="#constructor.summary">Constr</a>&nbsp;|&nbsp;</li>
+<li><a href="#method.summary">Method</a></li>
+</ul>
+<ul class="subNavList">
+<li>Detail:&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li><a href="#constructor.detail">Constr</a>&nbsp;|&nbsp;</li>
+<li><a href="#method.detail">Method</a></li>
+</ul>
+</div>
+<a name="skip.navbar.top">
+<!-- -->
+</a></div>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<!-- ======== START OF CLASS DATA ======== -->
+<div class="header">
+<div class="subTitle">jcgp.gui.console</div>
+<h2 title="Class ConsolePane" class="title">Class ConsolePane</h2>
+</div>
+<div class="contentContainer">
+<ul class="inheritance">
+<li>java.lang.Object</li>
+<li>
+<ul class="inheritance">
+<li>javafx.scene.Node</li>
+<li>
+<ul class="inheritance">
+<li>javafx.scene.Parent</li>
+<li>
+<ul class="inheritance">
+<li>javafx.scene.layout.Region</li>
+<li>
+<ul class="inheritance">
+<li>javafx.scene.layout.Pane</li>
+<li>
+<ul class="inheritance">
+<li>javafx.scene.layout.AnchorPane</li>
+<li>
+<ul class="inheritance">
+<li>jcgp.gui.console.ConsolePane</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+<div class="description">
+<ul class="blockList">
+<li class="blockList">
+<dl>
+<dt>All Implemented Interfaces:</dt>
+<dd>javafx.css.Styleable, javafx.event.EventTarget, <a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></dd>
+</dl>
+<hr>
+<br>
+<pre>public class <span class="typeNameLabel">ConsolePane</span>
+extends javafx.scene.layout.AnchorPane
+implements <a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></pre>
+<div class="block">Console pane used by the GUI to display CGP output messages.
+ This class realises <code>Console</code>. It consists of a JavaFX
+ <code>TextArea</code> and a <code>StringBuffer</code>. The buffer is filled
+ as print messages are queued. Calling <code>flush()</code> writes the
+ contents of the buffer to the <code>TextArea</code> and empties the buffer.</div>
+<dl>
+<dt><span class="simpleTagLabel">Author:</span></dt>
+<dd>Eduardo Pedroni</dd>
+<dt><span class="seeLabel">See Also:</span></dt>
+<dd><a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources"><code>Console</code></a></dd>
+</dl>
+</li>
+</ul>
+</div>
+<div class="summary">
+<ul class="blockList">
+<li class="blockList">
+<!-- =========== PROPERTY SUMMARY =========== -->
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+<li class="blockList"><a name="property.summary">
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+<!-- -->
+</a>
+<h3>Properties inherited from class&nbsp;javafx.scene.layout.Region</h3>
+<code>backgroundProperty, borderProperty, cacheShapeProperty, centerShapeProperty, heightProperty, insetsProperty, maxHeightProperty, maxWidthProperty, minHeightProperty, minWidthProperty, opaqueInsetsProperty, paddingProperty, prefHeightProperty, prefWidthProperty, scaleShapeProperty, shapeProperty, snapToPixelProperty, widthProperty</code></li>
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+<h3>Properties inherited from class&nbsp;javafx.scene.Parent</h3>
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+</a>
+<h3>Properties inherited from class&nbsp;javafx.scene.Node</h3>
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+</ul>
+<!-- =========== FIELD SUMMARY =========== -->
+<ul class="blockList">
+<li class="blockList"><a name="field.summary">
+<!-- -->
+</a>
+<h3>Field Summary</h3>
+<ul class="blockList">
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+<!-- -->
+</a>
+<h3>Fields inherited from class&nbsp;javafx.scene.layout.Region</h3>
+<code>USE_COMPUTED_SIZE, USE_PREF_SIZE</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="fields.inherited.from.class.javafx.scene.Node">
+<!-- -->
+</a>
+<h3>Fields inherited from class&nbsp;javafx.scene.Node</h3>
+<code>BASELINE_OFFSET_SAME_AS_HEIGHT</code></li>
+</ul>
+</li>
+</ul>
+<!-- ======== CONSTRUCTOR SUMMARY ======== -->
+<ul class="blockList">
+<li class="blockList"><a name="constructor.summary">
+<!-- -->
+</a>
+<h3>Constructor Summary</h3>
+<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation">
+<caption><span>Constructors</span><span class="tabEnd">&nbsp;</span></caption>
+<tr>
+<th class="colOne" scope="col">Constructor and Description</th>
+</tr>
+<tr class="altColor">
+<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/gui/console/ConsolePane.html#ConsolePane--">ConsolePane</a></span>()</code>
+<div class="block">Creates a new instance of this class.</div>
+</td>
+</tr>
+</table>
+</li>
+</ul>
+<!-- ========== METHOD SUMMARY =========== -->
+<ul class="blockList">
+<li class="blockList"><a name="method.summary">
+<!-- -->
+</a>
+<h3>Method Summary</h3>
+<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation">
+<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
+<tr>
+<th class="colFirst" scope="col">Modifier and Type</th>
+<th class="colLast" scope="col">Method and Description</th>
+</tr>
+<tr id="i0" class="altColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/console/ConsolePane.html#flush--">flush</a></span>()</code>
+<div class="block">Outputs all buffered messages to the console.</div>
+</td>
+</tr>
+<tr id="i1" class="rowColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/console/ConsolePane.html#print-java.lang.String-">print</a></span>(java.lang.String&nbsp;s)</code>
+<div class="block">Prints a string without line break at the end (unless the string
+ itself specifies one).</div>
+</td>
+</tr>
+<tr id="i2" class="altColor">
+<td class="colFirst"><code>void</code></td>
+<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/console/ConsolePane.html#println-java.lang.String-">println</a></span>(java.lang.String&nbsp;s)</code>
+<div class="block">Prints a string and automatically adds a line break at the end.</div>
+</td>
+</tr>
+</table>
+<ul class="blockList">
+<li class="blockList"><a name="methods.inherited.from.class.javafx.scene.layout.AnchorPane">
+<!-- -->
+</a>
+<h3>Methods inherited from class&nbsp;javafx.scene.layout.AnchorPane</h3>
+<code>clearConstraints, getBottomAnchor, getLeftAnchor, getRightAnchor, getTopAnchor, setBottomAnchor, setLeftAnchor, setRightAnchor, setTopAnchor</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods.inherited.from.class.javafx.scene.layout.Pane">
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+<h3>Methods inherited from class&nbsp;javafx.scene.layout.Pane</h3>
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+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods.inherited.from.class.javafx.scene.layout.Region">
+<!-- -->
+</a>
+<h3>Methods inherited from class&nbsp;javafx.scene.layout.Region</h3>
+<code>backgroundProperty, borderProperty, cacheShapeProperty, centerShapeProperty, getBackground, getBorder, getClassCssMetaData, getCssMetaData, getHeight, getInsets, getMaxHeight, getMaxWidth, getMinHeight, getMinWidth, getOpaqueInsets, getPadding, getPrefHeight, getPrefWidth, getShape, getWidth, heightProperty, impl_computeGeomBounds, impl_createPeer, impl_updatePeer, insetsProperty, isCacheShape, isCenterShape, isResizable, isScaleShape, isSnapToPixel, layoutInArea, maxHeight, maxHeightProperty, maxWidth, maxWidthProperty, minHeight, minHeightProperty, minWidth, minWidthProperty, opaqueInsetsProperty, paddingProperty, positionInArea, prefHeight, prefHeightProperty, prefWidth, prefWidthProperty, resize, scaleShapeProperty, setBackground, setBorder, setCacheShape, setCenterShape, setMaxHeight, setMaxSize, setMaxWidth, setMinHeight, setMinSize, setMinWidth, setOpaqueInsets, setPadding, setPrefHeight, setPrefSize, setPrefWidth, setScaleShape, setShape, setSnapToPixel, shapeProperty, snappedBottomInset, snappedLeftInset, snappedRightInset, snappedTopInset, snapToPixelProperty, widthProperty</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods.inherited.from.class.javafx.scene.Parent">
+<!-- -->
+</a>
+<h3>Methods inherited from class&nbsp;javafx.scene.Parent</h3>
+<code>getBaselineOffset, getChildrenUnmodifiable, getImpl_traversalEngine, getStylesheets, impl_getAllParentStylesheets, impl_processMXNode, impl_traversalEngineProperty, isNeedsLayout, layout, lookup, needsLayoutProperty, requestLayout, setImpl_traversalEngine</code></li>
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+<!-- -->
+</a>
+<h3>Methods inherited from class&nbsp;javafx.scene.Node</h3>
+<code>addEventFilter, addEventHandler, applyCss, autosize, blendModeProperty, boundsInLocalProperty, boundsInParentProperty, buildEventDispatchChain, cacheHintProperty, cacheProperty, clipProperty, computeAreaInScreen, contains, contains, cursorProperty, depthTestProperty, disabledProperty, disableProperty, effectiveNodeOrientationProperty, effectProperty, eventDispatcherProperty, fireEvent, focusedProperty, focusTraversableProperty, getBlendMode, getBoundsInLocal, getBoundsInParent, getCacheHint, getClip, getContentBias, getCursor, getDepthTest, getEffect, getEffectiveNodeOrientation, getEventDispatcher, getId, getInputMethodRequests, getLayoutBounds, getLayoutX, getLayoutY, getLocalToParentTransform, getLocalToSceneTransform, getNodeOrientation, getOnContextMenuRequested, getOnDragDetected, getOnDragDone, getOnDragDropped, getOnDragEntered, getOnDragExited, getOnDragOver, getOnInputMethodTextChanged, getOnKeyPressed, getOnKeyReleased, getOnKeyTyped, getOnMouseClicked, getOnMouseDragEntered, getOnMouseDragExited, getOnMouseDragged, getOnMouseDragOver, getOnMouseDragReleased, getOnMouseEntered, getOnMouseExited, getOnMouseMoved, getOnMousePressed, getOnMouseReleased, getOnRotate, getOnRotationFinished, getOnRotationStarted, getOnScroll, getOnScrollFinished, getOnScrollStarted, getOnSwipeDown, getOnSwipeLeft, getOnSwipeRight, getOnSwipeUp, getOnTouchMoved, getOnTouchPressed, getOnTouchReleased, getOnTouchStationary, getOnZoom, getOnZoomFinished, getOnZoomStarted, getOpacity, getParent, getProperties, getPseudoClassStates, getRotate, getRotationAxis, getScaleX, getScaleY, getScaleZ, getScene, getStyle, getStyleableParent, getStyleClass, getTransforms, getTranslateX, getTranslateY, getTranslateZ, getTypeSelector, getUserData, hasProperties, hoverProperty, idProperty, impl_getAccessible, impl_getLeafTransform, impl_getMatchingStyles, impl_getPeer, impl_getPivotX, impl_getPivotY, impl_getPivotZ, impl_getStyleMap, impl_hasTransforms, impl_isShowMnemonics, impl_isTreeVisible, impl_pickNode, impl_processCSS, impl_reapplyCSS, impl_setShowMnemonics, impl_setStyleMap, impl_showMnemonicsProperty, impl_syncPeer, impl_transformsChanged, impl_traverse, inputMethodRequestsProperty, intersects, intersects, isCache, isDisable, isDisabled, isFocused, isFocusTraversable, isHover, isManaged, isMouseTransparent, isPickOnBounds, isPressed, isVisible, layoutBoundsProperty, layoutXProperty, layoutYProperty, localToParent, localToParent, localToParent, localToParent, localToParent, localToParentTransformProperty, localToScene, localToScene, localToScene, localToScene, localToScene, localToSceneTransformProperty, localToScreen, localToScreen, localToScreen, localToScreen, localToScreen, lookupAll, managedProperty, mouseTransparentProperty, nodeOrientationProperty, onContextMenuRequestedProperty, onDragDetectedProperty, onDragDoneProperty, onDragDroppedProperty, onDragEnteredProperty, onDragExitedProperty, onDragOverProperty, onInputMethodTextChangedProperty, onKeyPressedProperty, onKeyReleasedProperty, onKeyTypedProperty, onMouseClickedProperty, onMouseDragEnteredProperty, onMouseDragExitedProperty, onMouseDraggedProperty, onMouseDragOverProperty, onMouseDragReleasedProperty, onMouseEnteredProperty, onMouseExitedProperty, onMouseMovedProperty, onMousePressedProperty, onMouseReleasedProperty, onRotateProperty, onRotationFinishedProperty, onRotationStartedProperty, onScrollFinishedProperty, onScrollProperty, onScrollStartedProperty, onSwipeDownProperty, onSwipeLeftProperty, onSwipeRightProperty, onSwipeUpProperty, onTouchMovedProperty, onTouchPressedProperty, onTouchReleasedProperty, onTouchStationaryProperty, onZoomFinishedProperty, onZoomProperty, onZoomStartedProperty, opacityProperty, parentProperty, parentToLocal, parentToLocal, parentToLocal, parentToLocal, parentToLocal, pickOnBoundsProperty, pressedProperty, pseudoClassStateChanged, relocate, removeEventFilter, removeEventHandler, requestFocus, resizeRelocate, rotateProperty, rotationAxisProperty, scaleXProperty, scaleYProperty, scaleZProperty, sceneProperty, sceneToLocal, sceneToLocal, sceneToLocal, sceneToLocal, sceneToLocal, screenToLocal, screenToLocal, screenToLocal, setBlendMode, setCache, setCacheHint, setClip, setCursor, setDepthTest, setDisable, setEffect, setEventDispatcher, setFocusTraversable, setId, setInputMethodRequests, setLayoutX, setLayoutY, setManaged, setMouseTransparent, setNodeOrientation, setOnContextMenuRequested, setOnDragDetected, setOnDragDone, setOnDragDropped, setOnDragEntered, setOnDragExited, setOnDragOver, setOnInputMethodTextChanged, setOnKeyPressed, setOnKeyReleased, setOnKeyTyped, setOnMouseClicked, setOnMouseDragEntered, setOnMouseDragExited, setOnMouseDragged, setOnMouseDragOver, setOnMouseDragReleased, setOnMouseEntered, setOnMouseExited, setOnMouseMoved, setOnMousePressed, setOnMouseReleased, setOnRotate, setOnRotationFinished, setOnRotationStarted, setOnScroll, setOnScrollFinished, setOnScrollStarted, setOnSwipeDown, setOnSwipeLeft, setOnSwipeRight, setOnSwipeUp, setOnTouchMoved, setOnTouchPressed, setOnTouchReleased, setOnTouchStationary, setOnZoom, setOnZoomFinished, setOnZoomStarted, setOpacity, setPickOnBounds, setRotate, setRotationAxis, setScaleX, setScaleY, setScaleZ, setStyle, setTranslateX, setTranslateY, setTranslateZ, setUserData, setVisible, snapshot, snapshot, startDragAndDrop, startFullDrag, styleProperty, toBack, toFront, toString, translateXProperty, translateYProperty, translateZProperty, usesMirroring, visibleProperty</code></li>
+</ul>
+<ul class="blockList">
+<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object">
+<!-- -->
+</a>
+<h3>Methods inherited from class&nbsp;java.lang.Object</h3>
+<code>equals, getClass, hashCode, notify, notifyAll, wait, wait, wait</code></li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+<div class="details">
+<ul class="blockList">
+<li class="blockList">
+<!-- ========= CONSTRUCTOR DETAIL ======== -->
+<ul class="blockList">
+<li class="blockList"><a name="constructor.detail">
+<!-- -->
+</a>
+<h3>Constructor Detail</h3>
+<a name="ConsolePane--">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>ConsolePane</h4>
+<pre>public&nbsp;ConsolePane()</pre>
+<div class="block">Creates a new instance of this class.</div>
+</li>
+</ul>
+</li>
+</ul>
+<!-- ============ METHOD DETAIL ========== -->
+<ul class="blockList">
+<li class="blockList"><a name="method.detail">
+<!-- -->
+</a>
+<h3>Method Detail</h3>
+<a name="println-java.lang.String-">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>println</h4>
+<pre>public&nbsp;void&nbsp;println(java.lang.String&nbsp;s)</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from interface:&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html#println-java.lang.String-">Console</a></code></span></div>
+<div class="block">Prints a string and automatically adds a line break at the end.</div>
+<dl>
+<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
+<dd><code><a href="../../../jcgp/backend/resources/Console.html#println-java.lang.String-">println</a></code>&nbsp;in interface&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></code></dd>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>s</code> - the string to print.</dd>
+</dl>
+</li>
+</ul>
+<a name="print-java.lang.String-">
+<!-- -->
+</a>
+<ul class="blockList">
+<li class="blockList">
+<h4>print</h4>
+<pre>public&nbsp;void&nbsp;print(java.lang.String&nbsp;s)</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from interface:&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html#print-java.lang.String-">Console</a></code></span></div>
+<div class="block">Prints a string without line break at the end (unless the string
+ itself specifies one).</div>
+<dl>
+<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
+<dd><code><a href="../../../jcgp/backend/resources/Console.html#print-java.lang.String-">print</a></code>&nbsp;in interface&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></code></dd>
+<dt><span class="paramLabel">Parameters:</span></dt>
+<dd><code>s</code> - the string to print.</dd>
+</dl>
+</li>
+</ul>
+<a name="flush--">
+<!-- -->
+</a>
+<ul class="blockListLast">
+<li class="blockList">
+<h4>flush</h4>
+<pre>public&nbsp;void&nbsp;flush()</pre>
+<div class="block"><span class="descfrmTypeLabel">Description copied from interface:&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html#flush--">Console</a></code></span></div>
+<div class="block">Outputs all buffered messages to the console. Only necessary
+ if concurrent accesses must be avoided.</div>
+<dl>
+<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
+<dd><code><a href="../../../jcgp/backend/resources/Console.html#flush--">flush</a></code>&nbsp;in interface&nbsp;<code><a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></code></dd>
+</dl>
+</li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+</div>
+</div>
+<!-- ========= END OF CLASS DATA ========= -->
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<div class="bottomNav"><a name="navbar.bottom">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.bottom.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../overview-summary.html">Overview</a></li>
+<li><a href="package-summary.html">Package</a></li>
+<li class="navBarCell1Rev">Class</li>
+<li><a href="class-use/ConsolePane.html">Use</a></li>
+<li><a href="package-tree.html">Tree</a></li>
+<li><a href="../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li>Prev&nbsp;Class</li>
+<li>Next&nbsp;Class</li>
+</ul>
+<ul class="navList">
+<li><a href="../../../index.html?jcgp/gui/console/ConsolePane.html" target="_top">Frames</a></li>
+<li><a href="ConsolePane.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_bottom">
+<li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_bottom");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<div>
+<ul class="subNavList">
+<li>Summary:&nbsp;</li>
+<li>Nested&nbsp;|&nbsp;</li>
+<li><a href="#fields.inherited.from.class.javafx.scene.layout.Region">Field</a>&nbsp;|&nbsp;</li>
+<li><a href="#constructor.summary">Constr</a>&nbsp;|&nbsp;</li>
+<li><a href="#method.summary">Method</a></li>
+</ul>
+<ul class="subNavList">
+<li>Detail:&nbsp;</li>
+<li>Field&nbsp;|&nbsp;</li>
+<li><a href="#constructor.detail">Constr</a>&nbsp;|&nbsp;</li>
+<li><a href="#method.detail">Method</a></li>
+</ul>
+</div>
+<a name="skip.navbar.bottom">
+<!-- -->
+</a></div>
+<!-- ======== END OF BOTTOM NAVBAR ======= -->
+</body>
+</html>
diff --git a/doc/jcgp/gui/console/class-use/ConsolePane.html b/doc/jcgp/gui/console/class-use/ConsolePane.html
new file mode 100644
index 0000000..1809f6a
--- /dev/null
+++ b/doc/jcgp/gui/console/class-use/ConsolePane.html
@@ -0,0 +1,124 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
+<!-- NewPage -->
+<html lang="en">
+<head>
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
+<title>Uses of Class jcgp.gui.console.ConsolePane</title>
+<meta name="date" content="2014-05-12">
+<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
+<script type="text/javascript" src="../../../../script.js"></script>
+</head>
+<body>
+<script type="text/javascript"><!--
+ try {
+ if (location.href.indexOf('is-external=true') == -1) {
+ parent.document.title="Uses of Class jcgp.gui.console.ConsolePane";
+ }
+ }
+ catch(err) {
+ }
+//-->
+</script>
+<noscript>
+<div>JavaScript is disabled on your browser.</div>
+</noscript>
+<!-- ========= START OF TOP NAVBAR ======= -->
+<div class="topNav"><a name="navbar.top">
+<!-- -->
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+<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.top.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../../overview-summary.html">Overview</a></li>
+<li><a href="../package-summary.html">Package</a></li>
+<li><a href="../../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">Class</a></li>
+<li class="navBarCell1Rev">Use</li>
+<li><a href="../package-tree.html">Tree</a></li>
+<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li>Prev</li>
+<li>Next</li>
+</ul>
+<ul class="navList">
+<li><a href="../../../../index.html?jcgp/gui/console/class-use/ConsolePane.html" target="_top">Frames</a></li>
+<li><a href="ConsolePane.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_top">
+<li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_top");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<a name="skip.navbar.top">
+<!-- -->
+</a></div>
+<!-- ========= END OF TOP NAVBAR ========= -->
+<div class="header">
+<h2 title="Uses of Class jcgp.gui.console.ConsolePane" class="title">Uses of Class<br>jcgp.gui.console.ConsolePane</h2>
+</div>
+<div class="classUseContainer">No usage of jcgp.gui.console.ConsolePane</div>
+<!-- ======= START OF BOTTOM NAVBAR ====== -->
+<div class="bottomNav"><a name="navbar.bottom">
+<!-- -->
+</a>
+<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
+<a name="navbar.bottom.firstrow">
+<!-- -->
+</a>
+<ul class="navList" title="Navigation">
+<li><a href="../../../../overview-summary.html">Overview</a></li>
+<li><a href="../package-summary.html">Package</a></li>
+<li><a href="../../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">Class</a></li>
+<li class="navBarCell1Rev">Use</li>
+<li><a href="../package-tree.html">Tree</a></li>
+<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
+<li><a href="../../../../index-files/index-1.html">Index</a></li>
+<li><a href="../../../../help-doc.html">Help</a></li>
+</ul>
+</div>
+<div class="subNav">
+<ul class="navList">
+<li>Prev</li>
+<li>Next</li>
+</ul>
+<ul class="navList">
+<li><a href="../../../../index.html?jcgp/gui/console/class-use/ConsolePane.html" target="_top">Frames</a></li>
+<li><a href="ConsolePane.html" target="_top">No&nbsp;Frames</a></li>
+</ul>
+<ul class="navList" id="allclasses_navbar_bottom">
+<li><a href="../../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
+</ul>
+<div>
+<script type="text/javascript"><!--
+ allClassesLink = document.getElementById("allclasses_navbar_bottom");
+ if(window==top) {
+ allClassesLink.style.display = "block";
+ }
+ else {
+ allClassesLink.style.display = "none";
+ }
+ //-->
+</script>
+</div>
+<a name="skip.navbar.bottom">
+<!-- -->
+</a></div>
+<!-- ======== END OF BOTTOM NAVBAR ======= -->
+</body>
+</html>
diff --git a/doc/jcgp/gui/console/package-frame.html b/doc/jcgp/gui/console/package-frame.html
index 05d367d..ef3c747 100644
--- a/doc/jcgp/gui/console/package-frame.html
+++ b/doc/jcgp/gui/console/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.console</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
@@ -13,7 +13,7 @@
<div class="indexContainer">
<h2 title="Classes">Classes</h2>
<ul title="Classes">
-<li><a href="GUIConsole.html" title="class in jcgp.gui.console" target="classFrame">GUIConsole</a></li>
+<li><a href="ConsolePane.html" title="class in jcgp.gui.console" target="classFrame">ConsolePane</a></li>
</ul>
</div>
</body>
diff --git a/doc/jcgp/gui/console/package-summary.html b/doc/jcgp/gui/console/package-summary.html
index 220f8cf..eb9d7cb 100644
--- a/doc/jcgp/gui/console/package-summary.html
+++ b/doc/jcgp/gui/console/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.console</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
@@ -83,7 +83,7 @@
</tr>
<tbody>
<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console">GUIConsole</a></td>
+<td class="colFirst"><a href="../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></td>
<td class="colLast">
<div class="block">Console pane used by the GUI to display CGP output messages.</div>
</td>
diff --git a/doc/jcgp/gui/console/package-tree.html b/doc/jcgp/gui/console/package-tree.html
index 068223e..505425b 100644
--- a/doc/jcgp/gui/console/package-tree.html
+++ b/doc/jcgp/gui/console/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.console Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
@@ -91,7 +91,7 @@
<ul>
<li type="circle">javafx.scene.layout.AnchorPane
<ul>
-<li type="circle">jcgp.gui.console.<a href="../../../jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console"><span class="typeNameLink">GUIConsole</span></a> (implements jcgp.backend.resources.<a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>)</li>
+<li type="circle">jcgp.gui.console.<a href="../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console"><span class="typeNameLink">ConsolePane</span></a> (implements jcgp.backend.resources.<a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>)</li>
</ul>
</li>
</ul>
diff --git a/doc/jcgp/gui/console/package-use.html b/doc/jcgp/gui/console/package-use.html
index f419778..e978efe 100644
--- a/doc/jcgp/gui/console/package-use.html
+++ b/doc/jcgp/gui/console/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.console</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/HorizontalDragResize.html b/doc/jcgp/gui/dragresize/HorizontalDragResize.html
index 4d47043..df298b7 100644
--- a/doc/jcgp/gui/dragresize/HorizontalDragResize.html
+++ b/doc/jcgp/gui/dragresize/HorizontalDragResize.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>HorizontalDragResize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/VerticalDragResize.html b/doc/jcgp/gui/dragresize/VerticalDragResize.html
index 28faeb5..5b6c2b3 100644
--- a/doc/jcgp/gui/dragresize/VerticalDragResize.html
+++ b/doc/jcgp/gui/dragresize/VerticalDragResize.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>VerticalDragResize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/class-use/HorizontalDragResize.html b/doc/jcgp/gui/dragresize/class-use/HorizontalDragResize.html
index afb6008..7fcf5da 100644
--- a/doc/jcgp/gui/dragresize/class-use/HorizontalDragResize.html
+++ b/doc/jcgp/gui/dragresize/class-use/HorizontalDragResize.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.dragresize.HorizontalDragResize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/class-use/VerticalDragResize.html b/doc/jcgp/gui/dragresize/class-use/VerticalDragResize.html
index e36108f..e4c7edb 100644
--- a/doc/jcgp/gui/dragresize/class-use/VerticalDragResize.html
+++ b/doc/jcgp/gui/dragresize/class-use/VerticalDragResize.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.dragresize.VerticalDragResize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/package-frame.html b/doc/jcgp/gui/dragresize/package-frame.html
index b26622d..249537a 100644
--- a/doc/jcgp/gui/dragresize/package-frame.html
+++ b/doc/jcgp/gui/dragresize/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.dragresize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/package-summary.html b/doc/jcgp/gui/dragresize/package-summary.html
index 576365e..37dd0d6 100644
--- a/doc/jcgp/gui/dragresize/package-summary.html
+++ b/doc/jcgp/gui/dragresize/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.dragresize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/package-tree.html b/doc/jcgp/gui/dragresize/package-tree.html
index 6c31fb7..21aeac4 100644
--- a/doc/jcgp/gui/dragresize/package-tree.html
+++ b/doc/jcgp/gui/dragresize/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.dragresize Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/dragresize/package-use.html b/doc/jcgp/gui/dragresize/package-use.html
index 5a4088d..82c6559 100644
--- a/doc/jcgp/gui/dragresize/package-use.html
+++ b/doc/jcgp/gui/dragresize/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.dragresize</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/package-frame.html b/doc/jcgp/gui/package-frame.html
index 69571ff..f7974f9 100644
--- a/doc/jcgp/gui/package-frame.html
+++ b/doc/jcgp/gui/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/package-summary.html b/doc/jcgp/gui/package-summary.html
index ce27245..6eae9db 100644
--- a/doc/jcgp/gui/package-summary.html
+++ b/doc/jcgp/gui/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
@@ -85,7 +85,7 @@
<tr class="altColor">
<td class="colFirst"><a href="../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a></td>
<td class="colLast">
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).</div>
</td>
</tr>
</tbody>
diff --git a/doc/jcgp/gui/package-tree.html b/doc/jcgp/gui/package-tree.html
index 4efeb4e..02729e9 100644
--- a/doc/jcgp/gui/package-tree.html
+++ b/doc/jcgp/gui/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/package-use.html b/doc/jcgp/gui/package-use.html
index d8af6e4..10a05f5 100644
--- a/doc/jcgp/gui/package-use.html
+++ b/doc/jcgp/gui/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../script.js"></script>
</head>
@@ -108,7 +108,7 @@
<tbody>
<tr class="altColor">
<td class="colOne"><a href="../../jcgp/gui/class-use/GUI.html#jcgp.gui.population">GUI</a>
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).</div>
</td>
</tr>
</tbody>
@@ -125,7 +125,7 @@
<tbody>
<tr class="altColor">
<td class="colOne"><a href="../../jcgp/gui/class-use/GUI.html#jcgp.gui.settings">GUI</a>
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).</div>
</td>
</tr>
</tbody>
@@ -142,7 +142,7 @@
<tbody>
<tr class="altColor">
<td class="colOne"><a href="../../jcgp/gui/class-use/GUI.html#jcgp.gui.settings.testcase">GUI</a>
-<div class="block">Main class for the graphical user interface (GUI)</div>
+<div class="block">Main class for the graphical user interface (GUI).</div>
</td>
</tr>
</tbody>
diff --git a/doc/jcgp/gui/population/ChromosomePane.html b/doc/jcgp/gui/population/ChromosomePane.html
index b9f895a..1ce9bd7 100644
--- a/doc/jcgp/gui/population/ChromosomePane.html
+++ b/doc/jcgp/gui/population/ChromosomePane.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:42 BST 2014 -->
<title>ChromosomePane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/FunctionSelector.html b/doc/jcgp/gui/population/FunctionSelector.html
index 085ad56..311c20c 100644
--- a/doc/jcgp/gui/population/FunctionSelector.html
+++ b/doc/jcgp/gui/population/FunctionSelector.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>FunctionSelector</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/GUIGene.GUIGeneState.html b/doc/jcgp/gui/population/GUIGene.GUIGeneState.html
index e3987de..78acf8f 100644
--- a/doc/jcgp/gui/population/GUIGene.GUIGeneState.html
+++ b/doc/jcgp/gui/population/GUIGene.GUIGeneState.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>GUIGene.GUIGeneState</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/GUIGene.html b/doc/jcgp/gui/population/GUIGene.html
index c0968e4..462a5e3 100644
--- a/doc/jcgp/gui/population/GUIGene.html
+++ b/doc/jcgp/gui/population/GUIGene.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>GUIGene</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/GUIInput.html b/doc/jcgp/gui/population/GUIInput.html
index 1e46a32..839f46d 100644
--- a/doc/jcgp/gui/population/GUIInput.html
+++ b/doc/jcgp/gui/population/GUIInput.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>GUIInput</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/GUINode.html b/doc/jcgp/gui/population/GUINode.html
index 01c4ae6..51fd777 100644
--- a/doc/jcgp/gui/population/GUINode.html
+++ b/doc/jcgp/gui/population/GUINode.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
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<title>GUINode</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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</head>
diff --git a/doc/jcgp/gui/population/GUIOutput.html b/doc/jcgp/gui/population/GUIOutput.html
index 173f05b..a8ffa82 100644
--- a/doc/jcgp/gui/population/GUIOutput.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
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<title>GUIOutput</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/PopulationPane.html b/doc/jcgp/gui/population/PopulationPane.html
index 28a95bc..7a5c039 100644
--- a/doc/jcgp/gui/population/PopulationPane.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>PopulationPane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/ChromosomePane.html b/doc/jcgp/gui/population/class-use/ChromosomePane.html
index 8fc23de..ec124d5 100644
--- a/doc/jcgp/gui/population/class-use/ChromosomePane.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.population.ChromosomePane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/population/class-use/FunctionSelector.html b/doc/jcgp/gui/population/class-use/FunctionSelector.html
index fcd369a..dc159c5 100644
--- a/doc/jcgp/gui/population/class-use/FunctionSelector.html
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@@ -2,9 +2,9 @@
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.population.FunctionSelector</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html b/doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html
index 3abb275..98ec0e6 100644
--- a/doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.GUIGene.GUIGeneState</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/GUIGene.html b/doc/jcgp/gui/population/class-use/GUIGene.html
index e5196a2..056c43d 100644
--- a/doc/jcgp/gui/population/class-use/GUIGene.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.GUIGene</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/GUIInput.html b/doc/jcgp/gui/population/class-use/GUIInput.html
index 94ba5d3..94dc7a6 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.GUIInput</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/GUINode.html b/doc/jcgp/gui/population/class-use/GUINode.html
index 3699a25..025b405 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.GUINode</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/GUIOutput.html b/doc/jcgp/gui/population/class-use/GUIOutput.html
index ef18d27..12b420e 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.GUIOutput</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/class-use/PopulationPane.html b/doc/jcgp/gui/population/class-use/PopulationPane.html
index 204f1af..0b51dbd 100644
--- a/doc/jcgp/gui/population/class-use/PopulationPane.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>Uses of Class jcgp.gui.population.PopulationPane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/package-frame.html b/doc/jcgp/gui/population/package-frame.html
index 5dd90b4..fb25383 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>jcgp.gui.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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</head>
diff --git a/doc/jcgp/gui/population/package-summary.html b/doc/jcgp/gui/population/package-summary.html
index 9dacefb..214d686 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/gui/population/package-tree.html b/doc/jcgp/gui/population/package-tree.html
index 600ec94..0e95523 100644
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.population Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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diff --git a/doc/jcgp/gui/population/package-use.html b/doc/jcgp/gui/population/package-use.html
index 84b76e7..b8d73ef 100644
--- a/doc/jcgp/gui/population/package-use.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.population</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/SettingsPane.html b/doc/jcgp/gui/settings/SettingsPane.html
index ad765ec..63f03d4 100644
--- a/doc/jcgp/gui/settings/SettingsPane.html
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<!-- NewPage -->
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:05 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:43 BST 2014 -->
<title>SettingsPane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/class-use/SettingsPane.html b/doc/jcgp/gui/settings/class-use/SettingsPane.html
index 210a4ff..7232d02 100644
--- a/doc/jcgp/gui/settings/class-use/SettingsPane.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.SettingsPane</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/package-frame.html b/doc/jcgp/gui/settings/package-frame.html
index 048067e..673f613 100644
--- a/doc/jcgp/gui/settings/package-frame.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
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<title>jcgp.gui.settings</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/package-summary.html b/doc/jcgp/gui/settings/package-summary.html
index c34a661..8c8abb6 100644
--- a/doc/jcgp/gui/settings/package-summary.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/package-tree.html b/doc/jcgp/gui/settings/package-tree.html
index 6e0d97e..d7b9375 100644
--- a/doc/jcgp/gui/settings/package-tree.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/package-use.html b/doc/jcgp/gui/settings/package-use.html
index 09022a8..d833851 100644
--- a/doc/jcgp/gui/settings/package-use.html
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.settings</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/GUIBooleanParameter.html b/doc/jcgp/gui/settings/parameters/GUIBooleanParameter.html
index 3b92cab..31fb114 100644
--- a/doc/jcgp/gui/settings/parameters/GUIBooleanParameter.html
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>GUIBooleanParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/GUIDoubleParameter.html b/doc/jcgp/gui/settings/parameters/GUIDoubleParameter.html
index 42ad718..da42511 100644
--- a/doc/jcgp/gui/settings/parameters/GUIDoubleParameter.html
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>GUIDoubleParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/GUIIntegerParameter.html b/doc/jcgp/gui/settings/parameters/GUIIntegerParameter.html
index 8880606..519fc75 100644
--- a/doc/jcgp/gui/settings/parameters/GUIIntegerParameter.html
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>GUIIntegerParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/GUIParameter.html b/doc/jcgp/gui/settings/parameters/GUIParameter.html
index 62e9ffe..82171cb 100644
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
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<title>GUIParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/parameters/class-use/GUIBooleanParameter.html b/doc/jcgp/gui/settings/parameters/class-use/GUIBooleanParameter.html
index 7c50b42..69e9611 100644
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.parameters.GUIBooleanParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/parameters/class-use/GUIDoubleParameter.html b/doc/jcgp/gui/settings/parameters/class-use/GUIDoubleParameter.html
index 9c2898b..589b5cf 100644
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<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.parameters.GUIDoubleParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/parameters/class-use/GUIIntegerParameter.html b/doc/jcgp/gui/settings/parameters/class-use/GUIIntegerParameter.html
index 8699e2f..ff5b259 100644
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<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.parameters.GUIIntegerParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
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diff --git a/doc/jcgp/gui/settings/parameters/class-use/GUIParameter.html b/doc/jcgp/gui/settings/parameters/class-use/GUIParameter.html
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<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.parameters.GUIParameter</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/package-frame.html b/doc/jcgp/gui/settings/parameters/package-frame.html
index cefb2da..2b9b587 100644
--- a/doc/jcgp/gui/settings/parameters/package-frame.html
+++ b/doc/jcgp/gui/settings/parameters/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/package-summary.html b/doc/jcgp/gui/settings/parameters/package-summary.html
index 4c42757..5af6b96 100644
--- a/doc/jcgp/gui/settings/parameters/package-summary.html
+++ b/doc/jcgp/gui/settings/parameters/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/package-tree.html b/doc/jcgp/gui/settings/parameters/package-tree.html
index 10d1b00..218974a 100644
--- a/doc/jcgp/gui/settings/parameters/package-tree.html
+++ b/doc/jcgp/gui/settings/parameters/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.parameters Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/parameters/package-use.html b/doc/jcgp/gui/settings/parameters/package-use.html
index 1a4faea..eff0576 100644
--- a/doc/jcgp/gui/settings/parameters/package-use.html
+++ b/doc/jcgp/gui/settings/parameters/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.settings.parameters</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/TestCaseTable.html b/doc/jcgp/gui/settings/testcase/TestCaseTable.html
index d8629d7..734ab46 100644
--- a/doc/jcgp/gui/settings/testcase/TestCaseTable.html
+++ b/doc/jcgp/gui/settings/testcase/TestCaseTable.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:06 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:44 BST 2014 -->
<title>TestCaseTable</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/class-use/TestCaseTable.html b/doc/jcgp/gui/settings/testcase/class-use/TestCaseTable.html
index 96cb1f2..e6a55cf 100644
--- a/doc/jcgp/gui/settings/testcase/class-use/TestCaseTable.html
+++ b/doc/jcgp/gui/settings/testcase/class-use/TestCaseTable.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Class jcgp.gui.settings.testcase.TestCaseTable</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/package-frame.html b/doc/jcgp/gui/settings/testcase/package-frame.html
index eb8b7fe..783cc21 100644
--- a/doc/jcgp/gui/settings/testcase/package-frame.html
+++ b/doc/jcgp/gui/settings/testcase/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.testcase</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/package-summary.html b/doc/jcgp/gui/settings/testcase/package-summary.html
index 04e97f1..2f080a2 100644
--- a/doc/jcgp/gui/settings/testcase/package-summary.html
+++ b/doc/jcgp/gui/settings/testcase/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.testcase</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/package-tree.html b/doc/jcgp/gui/settings/testcase/package-tree.html
index a490a72..3ac9b0e 100644
--- a/doc/jcgp/gui/settings/testcase/package-tree.html
+++ b/doc/jcgp/gui/settings/testcase/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp.gui.settings.testcase Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/gui/settings/testcase/package-use.html b/doc/jcgp/gui/settings/testcase/package-use.html
index 961f983..d13c075 100644
--- a/doc/jcgp/gui/settings/testcase/package-use.html
+++ b/doc/jcgp/gui/settings/testcase/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp.gui.settings.testcase</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
<script type="text/javascript" src="../../../../script.js"></script>
</head>
diff --git a/doc/jcgp/package-frame.html b/doc/jcgp/package-frame.html
index 4435a19..f53b5e9 100644
--- a/doc/jcgp/package-frame.html
+++ b/doc/jcgp/package-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/jcgp/package-summary.html b/doc/jcgp/package-summary.html
index c3d775d..fc1b08e 100644
--- a/doc/jcgp/package-summary.html
+++ b/doc/jcgp/package-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/jcgp/package-tree.html b/doc/jcgp/package-tree.html
index 37c5ee6..ce09199 100644
--- a/doc/jcgp/package-tree.html
+++ b/doc/jcgp/package-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>jcgp Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/jcgp/package-use.html b/doc/jcgp/package-use.html
index 39a6934..a9f9bb2 100644
--- a/doc/jcgp/package-use.html
+++ b/doc/jcgp/package-use.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Uses of Package jcgp</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
<script type="text/javascript" src="../script.js"></script>
</head>
diff --git a/doc/overview-frame.html b/doc/overview-frame.html
index 1fce504..6c31fa3 100644
--- a/doc/overview-frame.html
+++ b/doc/overview-frame.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Overview List</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
diff --git a/doc/overview-summary.html b/doc/overview-summary.html
index 1ce3fbb..a7bc205 100644
--- a/doc/overview-summary.html
+++ b/doc/overview-summary.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Overview</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
diff --git a/doc/overview-tree.html b/doc/overview-tree.html
index 715bc00..50d0d72 100644
--- a/doc/overview-tree.html
+++ b/doc/overview-tree.html
@@ -2,9 +2,9 @@
<!-- NewPage -->
<html lang="en">
<head>
-<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 -->
+<!-- Generated by javadoc (1.8.0_05) on Mon May 12 23:05:45 BST 2014 -->
<title>Class Hierarchy</title>
-<meta name="date" content="2014-05-06">
+<meta name="date" content="2014-05-12">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
<script type="text/javascript" src="script.js"></script>
</head>
@@ -240,7 +240,7 @@
<ul>
<li type="circle">javafx.scene.layout.AnchorPane
<ul>
-<li type="circle">jcgp.gui.console.<a href="jcgp/gui/console/GUIConsole.html" title="class in jcgp.gui.console"><span class="typeNameLink">GUIConsole</span></a> (implements jcgp.backend.resources.<a href="jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>)</li>
+<li type="circle">jcgp.gui.console.<a href="jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console"><span class="typeNameLink">ConsolePane</span></a> (implements jcgp.backend.resources.<a href="jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>)</li>
<li type="circle">jcgp.gui.settings.<a href="jcgp/gui/settings/SettingsPane.html" title="class in jcgp.gui.settings"><span class="typeNameLink">SettingsPane</span></a></li>
</ul>
</li>
diff --git a/src/jcgp/backend/modules/mutator/PointMutator.java b/src/jcgp/backend/modules/mutator/PointMutator.java
index 5aba0d1..6ba3e10 100644
--- a/src/jcgp/backend/modules/mutator/PointMutator.java
+++ b/src/jcgp/backend/modules/mutator/PointMutator.java
@@ -4,8 +4,6 @@ import jcgp.backend.parameters.BooleanParameter;
import jcgp.backend.parameters.IntegerParameter;
import jcgp.backend.population.Chromosome;
import jcgp.backend.population.Mutable;
-import jcgp.backend.population.Node;
-import jcgp.backend.population.Output;
import jcgp.backend.resources.Resources;
/**
@@ -40,43 +38,13 @@ public abstract class PointMutator extends Mutator {
// for however many genes must be mutated
for (int i = 0; i < genesMutated.get(); i++) {
+ // choose a random mutable
+ Mutable mutable = chromosome.getRandomMutable();
- Mutable m = chromosome.getRandomMutable();
+ if (report.get()) getResources().report("[Mutator] Mutation " + i + " selected " + mutable);
- if (report.get()) getResources().report("[Mutator] Mutation " + i + " selected " + m + ", ");
-
- // outputs and nodes are mutated differently
- if (m instanceof Output) {
- if (report.get()) getResources().report("changed source from " + ((Output) m).getSource() + " ");
-
- // outputs are easy, simply set to a different random connection, any will do
- m.setConnection(0, chromosome.getRandomConnection());
-
- if (report.get()) getResources().reportln("to " + ((Output) m).getSource());
- } else if (m instanceof Node) {
- /* nodes are more complicated, first we must decide whether to mutate the function
- * or a connection
- * we do this by generating a random int between 0 and 1 + arity
- */
- int geneType = getResources().getRandomInt(1 + getResources().arity());
-
- // if the int is less than 1, mutate function, else mutate connections
- if (geneType < 1) {
- if (report.get()) getResources().report("changed function from " + ((Node) m).getFunction() + " ");
-
- ((Node) m).setFunction(getResources().getRandomFunction());
-
- if (report.get()) getResources().reportln("to " + ((Node) m).getFunction());
- } else {
- // if we decided to mutate connection, subtract 1 from geneType so it fits into the arity range
- geneType--;
- if (report.get()) getResources().report("changed connection " + geneType + " from " + ((Node) m).getConnection(geneType) + " ");
-
- m.setConnection(geneType, chromosome.getRandomConnection(((Node) m).getColumn()));
-
- if (report.get()) getResources().reportln("to " + ((Node) m).getConnection(geneType));
- }
- }
+ // mutate a random gene
+ mutable.mutate();
}
}
diff --git a/src/jcgp/backend/modules/mutator/ProbabilisticMutator.java b/src/jcgp/backend/modules/mutator/ProbabilisticMutator.java
index 9273558..1ea1373 100644
--- a/src/jcgp/backend/modules/mutator/ProbabilisticMutator.java
+++ b/src/jcgp/backend/modules/mutator/ProbabilisticMutator.java
@@ -93,13 +93,13 @@ public class ProbabilisticMutator extends Mutator {
if (report.get()) getResources().report("[Mutator] Mutating " + out +
", changed source from " + out.getSource());
- out.setConnection(0, chromosome.getRandomConnection());
+ out.setSource(chromosome.getRandomConnection());
if (report.get()) getResources().reportln("to " + out.getSource());
}
}
- if (report.get()) getResources().reportln("[Mutator] Mutation finished ");
+ if (report.get()) getResources().reportln("[Mutator] Mutation finished");
}
diff --git a/src/jcgp/backend/parsers/ChromosomeParser.java b/src/jcgp/backend/parsers/ChromosomeParser.java
index 6106dbd..b892182 100644
--- a/src/jcgp/backend/parsers/ChromosomeParser.java
+++ b/src/jcgp/backend/parsers/ChromosomeParser.java
@@ -117,7 +117,7 @@ public abstract class ChromosomeParser {
newConnection = chromosome.getNode((gene - resources.inputs()) % resources.rows(),
(gene - resources.inputs()) / resources.rows());
}
- chromosome.getOutput(o).setConnection(0, newConnection);
+ chromosome.getOutput(o).setSource(newConnection);
}
in.close();
diff --git a/src/jcgp/backend/population/Chromosome.java b/src/jcgp/backend/population/Chromosome.java
index 673bb26..e28032c 100644
--- a/src/jcgp/backend/population/Chromosome.java
+++ b/src/jcgp/backend/population/Chromosome.java
@@ -149,7 +149,7 @@ public class Chromosome implements Comparable<Chromosome> {
// set random outputs
for (Output output : outputs) {
- output.setConnection(0, getRandomConnection());
+ output.setSource(getRandomConnection());
}
}
@@ -198,9 +198,9 @@ public class Chromosome implements Comparable<Chromosome> {
for (int o = 0; o < outputs.length; o++) {
copyOutput = clone.getOutput(o).getSource();
if (copyOutput instanceof Input) {
- outputs[o].setConnection(0, inputs[((Input) copyOutput).getIndex()]);
+ outputs[o].setSource(inputs[((Input) copyOutput).getIndex()]);
} else if (copyOutput instanceof Node) {
- outputs[o].setConnection(0, nodes[((Node) copyOutput).getRow()][((Node) copyOutput).getColumn()]);
+ outputs[o].setSource(nodes[((Node) copyOutput).getRow()][((Node) copyOutput).getColumn()]);
} else {
// something bad happened
System.out.println("Warning: Connection of subtype " + copyOutput.getClass().toString() + " is not explicitly handled by copy constructor.");
@@ -212,6 +212,16 @@ public class Chromosome implements Comparable<Chromosome> {
}
/**
+ * Returns a reference to the indexed input.
+ *
+ * @param index the input index.
+ * @return the input reference.
+ */
+ public Input getInput(int index) {
+ return inputs[index];
+ }
+
+ /**
* Returns a reference to any node, addressed by row and column.
*
* @param row the row of the node.
@@ -233,16 +243,6 @@ public class Chromosome implements Comparable<Chromosome> {
}
/**
- * Returns a reference to the indexed input.
- *
- * @param index the input index.
- * @return the input reference.
- */
- public Input getInput(int index) {
- return inputs[index];
- }
-
- /**
* @return the fitness of the chromosome.
*/
public double getFitness() {
diff --git a/src/jcgp/backend/population/Mutable.java b/src/jcgp/backend/population/Mutable.java
index 3ce7065..a5cbe37 100644
--- a/src/jcgp/backend/population/Mutable.java
+++ b/src/jcgp/backend/population/Mutable.java
@@ -8,8 +8,8 @@ package jcgp.backend.population;
* <br><br>
* This interface provides a way to deal with mutable elements
* generically without having to specify whether they are nodes
- * or outputs. In this way a random mutable element can be picked and
- * dealt with more easily, facilitating mutations.
+ * or outputs. When mutating a mutable, {@code mutate()} is guaranteed
+ * to perform a fair mutation.
*
* @author Eduardo Pedroni
*
@@ -17,14 +17,16 @@ package jcgp.backend.population;
public interface Mutable {
/**
- * This method sets the indexed connection to the specified new connection.
- * Implementing classes may choose to ignore the given index (such as in the
- * case of outputs, which only have one connection).
- *
- * @param index the connection index to set.
- * @param newConnection the chromosome element to connect to.
+ * This method performs an arbitrary mutation on the {@code Mutable}.
+ * <br><br>
+ * In the case of nodes, this chooses to mutate a function or connection
+ * fairly, and carries out the required mutation by using the node's own
+ * reference to chromosome.
+ * <br><br>
+ * In the case of outputs, this simply picks a random connection to serve
+ * as the source - any connection is allowed.
*/
- public void setConnection(int index, Connection newConnection);
+ public void mutate();
/**
* Asserts if the specified element is a copy of the elements
@@ -48,6 +50,6 @@ public interface Mutable {
* @param element the mutable element to compare to.
* @return true if {@code element} is a copy of this element.
*/
- boolean copyOf(Mutable element);
+ public boolean copyOf(Mutable element);
}
diff --git a/src/jcgp/backend/population/Node.java b/src/jcgp/backend/population/Node.java
index 3bcf3da..7712c50 100644
--- a/src/jcgp/backend/population/Node.java
+++ b/src/jcgp/backend/population/Node.java
@@ -3,6 +3,7 @@ package jcgp.backend.population;
import java.util.ArrayList;
import jcgp.backend.function.Function;
+import jcgp.backend.resources.Resources;
/**
* Nodes make up the main part of the chromosome,
@@ -16,6 +17,10 @@ import jcgp.backend.function.Function;
* (determined by the maximum arity of the function set)
* and must be reinstantiated if the experiment arity
* changes.
+ * <br><br>
+ * When mutating a node, it is easiest to use {@code mutate()}.
+ * Alternatively, you may also perform a specific mutation using
+ * {@code setConnection(...)} and {@code setFunction(...)}.
*
* @author Eduardo Pedroni
*
@@ -122,6 +127,24 @@ public class Node implements Mutable, Connection {
}
}
}
+
+ /**
+ * This method sets the indexed connection to the specified new connection.
+ * If the given connection is null or disrespects levels back, it is discarded
+ * and no connections are changed.
+ *
+ * @param index the connection index to set.
+ * @param newConnection the {@code Connection} to connect to.
+ */
+ public void setConnection(int index, Connection newConnection) {
+ // connection must not be null
+ if (newConnection != null) {
+ //if () {
+ connections[index] = newConnection;
+ chromosome.recomputeActiveNodes();
+ //}
+ }
+ }
@Override
public boolean copyOf(Mutable element) {
@@ -174,11 +197,19 @@ public class Node implements Mutable, Connection {
}
@Override
- public void setConnection(int index, Connection newConnection) {
- // connection must not be null
- if (newConnection != null) {
- connections[index] = newConnection;
- chromosome.recomputeActiveNodes();
+ public void mutate() {
+ Resources resources = chromosome.getResources();
+
+ // choose to mutate the function or a connection
+ int geneType = resources.getRandomInt(1 + resources.arity());
+
+ // if the int is less than 1, mutate function, else mutate connections
+ if (geneType < 1) {
+ setFunction(resources.getRandomFunction());
+ } else {
+ // if we decided to mutate connection, subtract 1 from geneType so it fits into the arity range
+ geneType--;
+ setConnection(geneType, chromosome.getRandomConnection(column));
}
}
diff --git a/src/jcgp/backend/population/Output.java b/src/jcgp/backend/population/Output.java
index 938741b..a346d4a 100644
--- a/src/jcgp/backend/population/Output.java
+++ b/src/jcgp/backend/population/Output.java
@@ -8,6 +8,10 @@ import java.util.ArrayList;
* returns the value of its single connection, but it
* may not be connected to - it terminates a chromosome
* active connection path.
+ * <br><br>
+ * When mutating an output, it is easiest to use {@code mutate()}.
+ * Alternatively, you may also perform a specific mutation using
+ * {@code setSource(...)}.
*
* @author Eduardo Pedroni
*
@@ -37,34 +41,47 @@ public class Output implements Mutable {
return source.getValue();
}
+ /**
+ * @return this output's index.
+ */
public int getIndex() {
return index;
}
+
+ /**
+ * This method sets the output source to the specified connection.
+ *
+ * @param newConnection the {@code Connection} to connect to.
+ */
+ public void setSource(Connection newConnection) {
+ source = newConnection;
+ // trigger active path recomputation
+ chromosome.recomputeActiveNodes();
+ }
+ /**
+ * @return the source of this output's value.
+ */
public Connection getSource() {
return source;
}
+ /**
+ * Calls {@code getActive(...)} on this output's
+ * source. This kicks off a recursive process whereby
+ * all nodes connected to this output are added to the
+ * specified list of nodes. This is used to create a
+ * list of all active nodes.
+ *
+ * @param activeNodes the list to add all active nodes to.
+ */
public void getActiveNodes(ArrayList<Node> activeNodes) {
+ // do not add if the source is an input
if (source instanceof Node) {
((Node) source).getActive(activeNodes);
}
}
- /**
- * When mutating an output, the index parameter
- * is simply ignored and the output source is
- * set.
- *
- * @see jcgp.backend.population.Mutable#setConnection(int, jcgp.backend.population.Connection)
- */
- @Override
- public void setConnection(int index, Connection newConnection) {
- source = newConnection;
- // trigger active path recomputation
- chromosome.recomputeActiveNodes();
- }
-
@Override
public boolean copyOf(Mutable m) {
// both cannot be the same instance
@@ -94,6 +111,12 @@ public class Output implements Mutable {
}
@Override
+ public void mutate() {
+ // simply change output to a new, random connection
+ setSource(chromosome.getRandomConnection());
+ }
+
+ @Override
public String toString() {
return "Output " + index;
}
diff --git a/src/jcgp/backend/tests/ChromosomeTests.java b/src/jcgp/backend/tests/ChromosomeTests.java
index b5c1da7..7cbf2e2 100644
--- a/src/jcgp/backend/tests/ChromosomeTests.java
+++ b/src/jcgp/backend/tests/ChromosomeTests.java
@@ -136,7 +136,7 @@ public class ChromosomeTests {
}
// mutate an output in clone, check that the same node in chromosome produces a different output
- clone.getOutput(1).setConnection(resources.getRandomInt(resources.arity()), clone.getInput(2));
+ clone.getOutput(1).setSource(clone.getInput(2));
assertTrue("Mutation affected nodes in both chromosomes.",
clone.getOutput(1).calculate() != chromosome.getOutput(1).calculate());
@@ -332,8 +332,8 @@ public class ChromosomeTests {
c.getNode(1, 1).initialise(resources.getFunction(0), c.getNode(0, 0), c.getInput(1));
c.getNode(1, 2).initialise(resources.getFunction(0), c.getNode(1, 1), c.getInput(2));
- c.getOutput(0).setConnection(0, c.getNode(0, 0));
- c.getOutput(1).setConnection(0, c.getNode(1, 2));
+ c.getOutput(0).setSource(c.getNode(0, 0));
+ c.getOutput(1).setSource(c.getNode(1, 2));
return c;
}
diff --git a/src/jcgp/backend/tests/OutputTests.java b/src/jcgp/backend/tests/OutputTests.java
index 8cc10a8..c5aa6b4 100644
--- a/src/jcgp/backend/tests/OutputTests.java
+++ b/src/jcgp/backend/tests/OutputTests.java
@@ -47,7 +47,7 @@ public class OutputTests {
@Test
public void evaluationsTest() {
// set source connection, check that the appropriate value is returned
- output.setConnection(0, new Connection() {
+ output.setSource(new Connection() {
@Override
public Object getValue() {
@@ -70,7 +70,7 @@ public class OutputTests {
return 0;
}
};
- output.setConnection(0, newConn);
+ output.setSource(newConn);
assertTrue("Incorrect connection returned.", output.getSource() == newConn);
}
diff --git a/src/jcgp/gui/GUI.java b/src/jcgp/gui/GUI.java
index 437a739..2f09dea 100644
--- a/src/jcgp/gui/GUI.java
+++ b/src/jcgp/gui/GUI.java
@@ -13,7 +13,7 @@ import javafx.stage.Stage;
import javafx.stage.WindowEvent;
import jcgp.JCGP;
import jcgp.backend.modules.problem.TestCaseProblem.TestCase;
-import jcgp.gui.console.GUIConsole;
+import jcgp.gui.console.ConsolePane;
import jcgp.gui.dragresize.HorizontalDragResize;
import jcgp.gui.dragresize.VerticalDragResize;
import jcgp.gui.population.FunctionSelector;
@@ -22,8 +22,25 @@ import jcgp.gui.population.PopulationPane;
import jcgp.gui.settings.SettingsPane;
/**
- * Main class for the graphical user interface (GUI)
- *
+ * Main class for the graphical user interface (GUI).
+ * <br><br>
+ * This class declares the main method used when running the GUI.
+ * In addition, all main GUI panes are declared and instantiated here.
+ * <br><br>
+ * The user interface is divided into 3 main components: the node grid
+ * ({@link PopulationPane}), the control pane ({@link SettingsPane}) and
+ * the console ({@link ConsolePane}). Click on any of the links in
+ * brackets to see more information about each interface component.
+ * <br><br>
+ * This class also contains the instance of JCGP responsible for
+ * running the experiments in GUI mode. JCGP's execution must be delegated
+ * to a separate thread so that the GUI remains unblocked. This is done using
+ * a JavaFX {@code Service} which calls {@code nextGeneration()} in a loop
+ * until it is interrupted by the main JavaFX thread.
+ * <br>
+ * This service also handles flushing the console in a thread safe way. This
+ * is done by synchronizing the {@code nextGeneration()} and {@code flush()}
+ * method calls on a lock object.
*
* @author Eduardo Pedroni
*
@@ -31,72 +48,213 @@ import jcgp.gui.settings.SettingsPane;
public class GUI extends Application {
/* Colours */
+ /**
+ * A string containing the hexadecimal colour used for representing neutrality.
+ */
public static final String NEUTRAL_COLOUR = "#FFFFFF";
+ /**
+ * A string containing the hexadecimal colour used for representing a hard highlight.
+ * A "hard" select, for instance, happens when an output path is locked on the chromosome
+ * pane.
+ */
public static final String HARD_HIGHLIGHT_COLOUR = "#5496FF";
+ /**
+ * A string containing the hexadecimal colour used for a medium highlight.
+ * One example of such a selection is the colour applied to a node
+ * when it is hovered over.
+ */
public static final String MEDIUM_HIGHLIGHT_COLOUR = "#75BAFF";
+ /**
+ * A string containing the hexadecimal colour used for a soft highlight.
+ * When hovering over a node, its connections are soft-selected.
+ */
public static final String SOFT_HIGHLIGHT_COLOUR = "#C7DFFF";
+ /**
+ * A string containing the hexadecimal colour used for representing a good selection.
+ * Ideally a shade of green, used for instance when a manual connection is valid.
+ */
public static final String GOOD_SELECTION_COLOUR = "#38C25B";
+ /**
+ * A string containing the hexadecimal colour used for representing a neutral selection.
+ * Ideally a shade of yellow, used for instance when a manual connection is already the
+ * current connection.
+ */
public static final String NEUTRAL_SELECTION_COLOUR = "#FFEF73";
+ /**
+ * A string containing the hexadecimal colour used for representing a bad selection.
+ * Ideally a shade of red, use for instance when a manual connection is not valid.
+ */
public static final String BAD_SELECTION_COLOUR = "#FF5C5C";
/* Sizes and distances */
+ /**
+ * The width or height of the area that can be clicked on
+ * to drag-resize a pane.
+ */
public static final double RESIZE_MARGIN = 5.0;
+ /**
+ * The minimum width of the settings pane, to prevent it
+ * from being resized beyond visibility.
+ */
public static final double SETTINGS_MIN_WIDTH = 200;
+ /**
+ * The minimum width of the console pane, to prevent it
+ * from being resized beyond visibility.
+ */
public static final double CONSOLE_MIN_HEIGHT = 100;
- private final JCGP jcgp;
-
+ /*
+ * Actual GUI elements
+ */
private Stage stage;
-
- private final FunctionSelector functionSelector;
-
private PopulationPane populationPane;
-
- private GUIConsole console;
-
+ private ConsolePane console;
private SettingsPane settingsPane;
+ private final FunctionSelector functionSelector;
+ /*
+ * Flow control objects
+ */
private boolean running = false;
-
private final Object printLock = new Object();
+ private Service<Void> jcgpService;
+ private Runnable consoleFlush;
- private Service<Void> cgpService;
+ /*
+ * The experiment itself
+ */
+ private final JCGP jcgp;
- private Runnable consoleFlush;
+ /**
+ * Start JCGP with the user interface.
+ *
+ * @param args no arguments are used.
+ */
public static void main(String[] args) {
+ // not much to do, simply launch the JavaFX application
launch();
}
+ /**
+ * Makes a new instance of GUI. This initialises the JCGP experiment and
+ * instantiates the function selector. It also creates the console flush task
+ * and the service responsible for running the JCGP experiment.
+ */
public GUI() {
jcgp = new JCGP();
functionSelector = new FunctionSelector(jcgp.getResources().getFunctionSet());
+ /*
+ * This task flushes the console in a thread-safe way.
+ * The problem is that this task is executed using Platform.runLater()
+ * to ensure that the flush itself happens on the JavaFX thread. However,
+ * runLater() is not guaranteed to run anytime soon. If the time taken for
+ * jcgp to perform a single generation is shorter than the time taken for
+ * this task to be executed by the platform, consoleFlush tasks will be
+ * scheduled faster than they can be executed and the console will eventually
+ * freeze.
+ *
+ * This is addressed by synchronizing the flushes with each nextGeneration() call.
+ */
consoleFlush = new Runnable() {
@Override
public void run() {
+ /*
+ * Try to acquire printlock - wait here until jcgpService relinquishes it
+ * by calling wait(). This means that it is finished with the current generation
+ * and will wait for the console to be flushed to move on.
+ * It might be the case that the service has already released the lock by waiting
+ * on it; it makes no difference. In that case this will acquire the lock
+ * immediately and proceed to flush the console.
+ */
synchronized(printLock) {
+ /*
+ * The lock is acquired, at this point we are certain that jcgpService
+ * cannot execute; it is currently waiting to be notified about the lock.
+ * No additional consoleFlush tasks can be scheduled with runLater() because
+ * the service is waiting. We can now take our time to flush the console.
+ */
console.flush();
+ /*
+ * Once the console finishes flushing, we notify jcgpService to perform the
+ * next generation.
+ */
printLock.notifyAll();
}
}
};
- cgpService = new Service<Void> () {
+ /*
+ * This service runs on a separate thread and performs
+ * the experiment, including console prints, in a thread-safe
+ * way. It is synchronized with consoleFlush.
+ */
+ jcgpService = new Service<Void> () {
@Override
protected Task<Void> createTask() {
Task<Void> t = new Task<Void>() {
@Override
protected Void call() throws Exception {
+ /*
+ * Only execute if the experiment isn't finished
+ * and the service hasn't been cancelled.
+ */
while (!isCancelled() && !jcgp.isFinished()) {
+ /*
+ * Attempt to acquire the printlock.
+ * Successfully doing so means no printing
+ * is currently taking place and we are free
+ * to schedule a print task.
+ * This lock acquisition should never block. It should
+ * not be possible to execute this statement without
+ * having been notified by consoleFlush.
+ */
synchronized (printLock) {
+ /*
+ * Lock has been acquired, schedule a print
+ * task ahead of time. The actual print messages
+ * haven't been send to the console yet, that happens
+ * during nextGeneration(), but since we have the lock
+ * consoleFlush() will sit and wait for us to release it
+ * whenever we are finished queueing prints.
+ */
Platform.runLater(consoleFlush);
+ /*
+ * Perform the actual generation. Here zero or more
+ * strings might be sent to the console buffer.
+ */
jcgp.nextGeneration();
+ /*
+ * The generation is complete, relinquish the lock.
+ * By this point chances are the platform is already trying
+ * to execute the consoleFlush task that we scheduled. If it
+ * hasn't already started though, it doesn't matter; we will
+ * wait for a notification on the lock, which will only come
+ * when printing is complete.
+ */
printLock.wait();
+ /*
+ * We have been notified. This means all buffered messages have
+ * been successfully flushed to the actual console control and
+ * we are now ready to perform another generation (or break out
+ * of the loop if the loop conditions are no longer met).
+ */
}
+ /*
+ * We no longer own the lock, but neither does consoleFlush.
+ * The synchrony cycle has returned to its initial state, and we
+ * are free to acquire the lock again.
+ */
}
+ /*
+ * Something happened to break the while loop -
+ * either the experiment finished or the user pressed
+ * pause.
+ */
if (jcgp.isFinished()) {
+ // the experiment has finished, switch to pause mode
Platform.runLater(new Runnable() {
@Override
public void run() {
@@ -114,60 +272,95 @@ public class GUI extends Application {
@Override
public void start(Stage primaryStage) throws Exception {
- console = new GUIConsole();
+ /*
+ * This method gets called when the application launches. Once it
+ * returns, the application falls into the main loop which handles
+ * events, so all elements must be constructed here.
+ */
+
+ // make the console and set it so it is used for JCGP prints
+ console = new ConsolePane();
jcgp.setConsole(console);
+
+ // store reference to the stage
stage = primaryStage;
+
/*
- * Instantiate the various GUI elements here.
- *
- *
+ * The experiment layer contains all of the experiment-related panes.
+ * The only element that sits higher than this is the function selector.
*/
- BorderPane leftFrame = new BorderPane();
BorderPane experimentLayer = new BorderPane();
+ /*
+ * The left frame encapsulates the population pane and the console.
+ * It goes into the center position of the experiment layer, next to the settings pane.
+ */
+ BorderPane leftFrame = new BorderPane();
+ /*
+ * The population pane is a TabPane containing a tab for each chromosome.
+ */
populationPane = new PopulationPane(this);
+ /*
+ * The settings pane is a big class containing the entire control pane
+ */
settingsPane = new SettingsPane(this);
- settingsPane.maxWidthProperty().bind(experimentLayer.widthProperty());
-
- console.maxHeightProperty().bind(experimentLayer.heightProperty());
+ // make control pane and console resizable
HorizontalDragResize.makeDragResizable(settingsPane);
VerticalDragResize.makeDragResizable(console);
-
+ // prevent resizables from growing larger than the experiment layer
+ settingsPane.maxWidthProperty().bind(experimentLayer.widthProperty());
+ console.maxHeightProperty().bind(experimentLayer.heightProperty());
+
+ // put console and population pane in the main frame
leftFrame.setCenter(populationPane);
leftFrame.setBottom(console);
+ // set the main frame and the control pane in the experiment layer
experimentLayer.setCenter(leftFrame);
experimentLayer.setRight(settingsPane);
+ /*
+ * Now we deal with the stage.
+ */
primaryStage.setTitle("JCGP");
+ // this pane holds the entire scene, that is its sole job.
Pane sceneParent = new Pane();
+ // the experiment layer should fill the entire scene parent
experimentLayer.prefHeightProperty().bind(sceneParent.heightProperty());
experimentLayer.prefWidthProperty().bind(sceneParent.widthProperty());
+ // the function selector goes over the experiment layer so it doesn't get covered by other panes
sceneParent.getChildren().addAll(experimentLayer, functionSelector);
+ // set the scene, minimum sizes, show
primaryStage.setScene(new Scene(sceneParent));
primaryStage.setMinWidth(800);
primaryStage.setMinHeight(600);
primaryStage.show();
+ // when the main stage closes, close the test case table as well
primaryStage.setOnCloseRequest(new EventHandler<WindowEvent>() {
@Override
public void handle(WindowEvent event) {
- settingsPane.getTestCaseTable().close();
+ if (settingsPane.getTestCaseTable() != null) {
+ settingsPane.getTestCaseTable().close();
+ }
}
});
}
+ /**
+ *
+ */
public void runPause() {
if (!jcgp.isFinished() && settingsPane.areParametersValid()) {
if (!running) {
runningMode(true);
- cgpService.restart();
+ jcgpService.restart();
} else {
- cgpService.cancel();
+ jcgpService.cancel();
runningMode(false);
}
}
diff --git a/src/jcgp/gui/console/GUIConsole.java b/src/jcgp/gui/console/ConsolePane.java
index b3d037c..c4cfc21 100644
--- a/src/jcgp/gui/console/GUIConsole.java
+++ b/src/jcgp/gui/console/ConsolePane.java
@@ -26,7 +26,7 @@ import jcgp.gui.GUI;
* @author Eduardo Pedroni
*
*/
-public class GUIConsole extends AnchorPane implements Console {
+public class ConsolePane extends AnchorPane implements Console {
private TextArea textArea = new TextArea("Welcome to JCGP!\n");
private StringBuffer printBuffer = new StringBuffer();
@@ -34,7 +34,7 @@ public class GUIConsole extends AnchorPane implements Console {
/**
* Creates a new instance of this class.
*/
- public GUIConsole() {
+ public ConsolePane() {
super();
textArea.setEditable(false);
diff --git a/src/jcgp/gui/population/GUIGene.java b/src/jcgp/gui/population/GUIGene.java
index 0eea045..3d9cffb 100644
--- a/src/jcgp/gui/population/GUIGene.java
+++ b/src/jcgp/gui/population/GUIGene.java
@@ -71,11 +71,6 @@ public abstract class GUIGene extends Group {
public abstract void addLocks(int value);
- /**
- *
- *
- * @param value
- */
public abstract void removeLocks(int value);
public abstract void updateLines();
diff --git a/src/jcgp/gui/population/GUIOutput.java b/src/jcgp/gui/population/GUIOutput.java
index 5a76298..364458b 100644
--- a/src/jcgp/gui/population/GUIOutput.java
+++ b/src/jcgp/gui/population/GUIOutput.java
@@ -266,7 +266,7 @@ public class GUIOutput extends GUIGene {
@Override
public void setChangingConnection(Connection newConnection) {
- output.setConnection(0, newConnection);
+ output.setSource(newConnection);
updateText();
}
diff --git a/src/jcgp/gui/settings/parameters/GUIParameter.java b/src/jcgp/gui/settings/parameters/GUIParameter.java
index f896fa3..9188aec 100644
--- a/src/jcgp/gui/settings/parameters/GUIParameter.java
+++ b/src/jcgp/gui/settings/parameters/GUIParameter.java
@@ -231,8 +231,6 @@ public abstract class GUIParameter<T> extends HBox {
* (INVALID_PARAMETER_STYLE, WARNING_PARAMETER_STYLE, VALID_PARAMETER_STYLE)
* provide a way to keep the GUI consistent.
*
- * TODO update this if the strings are externalised
- *
* @see ParameterStatus
*/
protected abstract void setValidityStyle();