Majorly refactored, node grid is fully implemented. About to attempt active path locking.

5 files changed, 0 insertions, 488 deletions

diff --git a/src/jcgp/modules/function/Arithmetic.java b/src/jcgp/modules/function/Arithmetic.java
deleted file mode 100644
index aa5e9bf..0000000
--- a/src/jcgp/modules/function/Arithmetic.java
+++ /dev/null
@@ -1,105 +0,0 @@
-package jcgp.modules.function;
-
-import jcgp.exceptions.InvalidArgumentsException;
-import jcgp.population.Connection;
-
-public class Arithmetic {
-
-	public static class Addition extends Function {
-
-		private int arity = 2;
-
-		@Override
-		public Integer run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Integer arg1 = ((Integer) connections[0].getValue());
-				Integer arg2 = ((Integer) connections[1].getValue());
-				Integer result = arg1 + arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Subtraction extends Function {
-
-		private int arity = 2;
-
-		@Override
-		public Integer run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Integer arg1 = ((Integer) connections[0].getValue());
-				Integer arg2 = ((Integer) connections[1].getValue());
-				Integer result = arg1 - arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Multiplication extends Function {
-
-		private int arity = 2;
-
-		@Override
-		public Integer run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Integer arg1 = ((Integer) connections[0].getValue());
-				Integer arg2 = ((Integer) connections[1].getValue());
-				Integer result = arg1 * arg2;
-
-				return result;
-			} 
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Division extends Function {
-
-		private int arity = 2;
-
-		@Override
-		public Integer run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Integer arg1 = ((Integer) connections[0].getValue());
-				Integer arg2 = ((Integer) connections[1].getValue());
-				Integer result;
-				if (arg2 == 0) {
-					result = 0;
-				} else {
-					result = arg1 / arg2;
-				}
-
-				return result;
-			} 
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-	
-}
diff --git a/src/jcgp/modules/function/BitwiseLogic.java b/src/jcgp/modules/function/BitwiseLogic.java
deleted file mode 100644
index c8452e6..0000000
--- a/src/jcgp/modules/function/BitwiseLogic.java
+++ /dev/null
@@ -1,163 +0,0 @@
-package jcgp.modules.function;
-
-import jcgp.exceptions.InvalidArgumentsException;
-import jcgp.population.Connection;
-
-public class BitwiseLogic {
-
-	public static class And extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 & arg2;
-				
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-	
-	public static class Or extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 | arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Not extends Function {	
-		private int arity = 1;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int result = ~arg1;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Xor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 ^ arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Nand extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 & arg2;
-
-				return ~result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Nor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 | arg2;
-
-				return ~result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Xnor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Object run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				int arg1 = ((int) connections[0].getValue());
-				int arg2 = ((int) connections[1].getValue());
-				int result = arg1 ^ arg2;
-
-				return ~result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	
-	
-}
diff --git a/src/jcgp/modules/function/BooleanLogic.java b/src/jcgp/modules/function/BooleanLogic.java
deleted file mode 100644
index f98d1db..0000000
--- a/src/jcgp/modules/function/BooleanLogic.java
+++ /dev/null
@@ -1,163 +0,0 @@
-package jcgp.modules.function;
-
-import jcgp.exceptions.InvalidArgumentsException;
-import jcgp.population.Connection;
-
-public class BooleanLogic {
-
-	public static class And extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 && arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-	
-	public static class Or extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 || arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Not extends Function {	
-		private int arity = 1;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean result = !arg1;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Xor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 ^ arg2;
-
-				return result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Nand extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 && arg2;
-
-				return !result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Nor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 || arg2;
-
-				return !result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	public static class Xnor extends Function {	
-		private int arity = 2;
-
-		@Override
-		public Boolean run(Connection... connections) {
-			if (connections.length < arity) {
-				throw new InvalidArgumentsException("Not enough connections were given.");
-			} else {
-				Boolean arg1 = ((Boolean) connections[0].getValue());
-				Boolean arg2 = ((Boolean) connections[1].getValue());
-				Boolean result = arg1 ^ arg2;
-
-				return !result;
-			}
-		}
-
-		@Override
-		public int getArity() {
-			return arity;
-		}
-	}
-
-	
-	
-}
diff --git a/src/jcgp/modules/function/Function.java b/src/jcgp/modules/function/Function.java
deleted file mode 100644
index 3314c2f..0000000
--- a/src/jcgp/modules/function/Function.java
+++ /dev/null
@@ -1,12 +0,0 @@
-package jcgp.modules.function;
-
-import jcgp.exceptions.InvalidArgumentsException;
-import jcgp.population.Connection;
-
-public abstract class Function {
-		
-	public abstract Object run(Connection ... connections) throws InvalidArgumentsException;
-	
-	public abstract int getArity();
-	
-}
diff --git a/src/jcgp/modules/function/FunctionSet.java b/src/jcgp/modules/function/FunctionSet.java
deleted file mode 100644
index fb3724f..0000000
--- a/src/jcgp/modules/function/FunctionSet.java
+++ /dev/null
@@ -1,45 +0,0 @@
-package jcgp.modules.function;
-
-/**
- * 
- * TODO: if function set flexibility is desired (i.e. add more functions as the program runs)
- * an add function method should be created
- * this would lead to concurrency problems, so tread lightly!
- * 
- * 
- * @author Eduardo Pedroni
- *
- */
-public class FunctionSet {
-		private Function[] functionList;
-		private int maxArity = 0;
-		private String name;
-		
-		public FunctionSet(String name, Function ... functions) {
-			functionList = functions;
-			for (Function function : functionList) {
-				if (function.getArity() > maxArity) {
-					maxArity = function.getArity();
-				}
-			}
-			
-			this.name = name;
-			
-		}
-		
-		public int getFunctionCount() {
-			return functionList.length;
-		}
-		
-		public Function getFunction(int index) {
-			return functionList[index];
-		}
-		
-		public int getMaxArity(){
-			return maxArity;
-		}
-		
-		public String getName() {
-			return name;
-		}
-	}
\ No newline at end of file