Removed reflection for now, added fitness orientation support

4 files changed, 11 insertions, 11 deletions

diff --git a/src/jcgp/backend/population/Chromosome.java b/src/jcgp/backend/population/Chromosome.java
index 0dfa801..673bb26 100644
--- a/src/jcgp/backend/population/Chromosome.java
+++ b/src/jcgp/backend/population/Chromosome.java
@@ -283,12 +283,12 @@ public class Chromosome implements Comparable<Chromosome> {
 
 	/**
 	 * This method is useful for mutating chromosomes. It returns any
-	 * random {@code MutableElement} out of the chromosome with equal
+	 * random {@code Mutable} out of the chromosome with equal
 	 * probability. 
 	 * 
 	 * @return a random element that can be mutated - node or output.
 	 */
-	public MutableElement getRandomMutableElement() {
+	public Mutable getRandomMutable() {
 		// choose output or node
 		int index = resources.getRandomInt(outputs.length + (resources.rows() * resources.columns()));
 
diff --git a/src/jcgp/backend/population/MutableElement.java b/src/jcgp/backend/population/Mutable.java
index 5782a99..3ce7065 100644
--- a/src/jcgp/backend/population/MutableElement.java
+++ b/src/jcgp/backend/population/Mutable.java
@@ -1,7 +1,7 @@
 package jcgp.backend.population;
 
 /**
- * {@code MutableElement} declares the expected behaviour of any
+ * {@code Mutable} declares the expected behaviour of any
  * part of a chromosome that is mutable, more specifically
  * nodes or outputs. Inputs are not mutable since they don't have
  * connections or functions.
@@ -14,7 +14,7 @@ package jcgp.backend.population;
  * @author Eduardo Pedroni
  *
  */
-public interface MutableElement {
+public interface Mutable {
 	
 	/**
 	 * This method sets the indexed connection to the specified new connection.
@@ -48,6 +48,6 @@ public interface MutableElement {
 	 * @param element the mutable element to compare to.
 	 * @return true if {@code element} is a copy of this element.
 	 */
-	boolean copyOf(MutableElement element);
+	boolean copyOf(Mutable element);
 	
 }
diff --git a/src/jcgp/backend/population/Node.java b/src/jcgp/backend/population/Node.java
index 704b24e..3bcf3da 100644
--- a/src/jcgp/backend/population/Node.java
+++ b/src/jcgp/backend/population/Node.java
@@ -10,7 +10,7 @@ import jcgp.backend.function.Function;
  * contains a function and a number of connections.
  * The node outputs the result of performing its function
  * on the values of its connections. Nodes therefore
- * implement both {@code MutableElement} and {@code Connection}
+ * implement both {@code Mutable} and {@code Connection}
  * since they can be mutated but also connected to. 
  * Nodes are constructed with a fixed number of connections
  * (determined by the maximum arity of the function set)
@@ -20,7 +20,7 @@ import jcgp.backend.function.Function;
  * @author Eduardo Pedroni
  *
  */
-public class Node implements MutableElement, Connection {
+public class Node implements Mutable, Connection {
 
 	private Function function;
 	private Connection[] connections;
@@ -124,7 +124,7 @@ public class Node implements MutableElement, Connection {
 	}
 
 	@Override
-	public boolean copyOf(MutableElement element) {
+	public boolean copyOf(Mutable element) {
 		// both cannot be the same instance
 		if (this != element) {
 			// element must be instance of node
diff --git a/src/jcgp/backend/population/Output.java b/src/jcgp/backend/population/Output.java
index ab693e2..938741b 100644
--- a/src/jcgp/backend/population/Output.java
+++ b/src/jcgp/backend/population/Output.java
@@ -12,7 +12,7 @@ import java.util.ArrayList;
  * @author Eduardo Pedroni
  *
  */
-public class Output implements MutableElement {
+public class Output implements Mutable {
 	
 	private Connection source;
 	private Chromosome chromosome;
@@ -56,7 +56,7 @@ public class Output implements MutableElement {
 	 * is simply ignored and the output source is
 	 * set. 
 	 * 
-	 * @see jcgp.backend.population.MutableElement#setConnection(int, jcgp.backend.population.Connection)
+	 * @see jcgp.backend.population.Mutable#setConnection(int, jcgp.backend.population.Connection)
 	 */
 	@Override
 	public void setConnection(int index, Connection newConnection) {
@@ -66,7 +66,7 @@ public class Output implements MutableElement {
 	}
 	
 	@Override
-	public boolean copyOf(MutableElement m) {
+	public boolean copyOf(Mutable m) {
 		// both cannot be the same instance
 		if (this != m) {
 			// element must be instance of output