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authorEduardo Pedroni <e.pedroni91@gmail.com>2014-10-18 15:21:45 +0200
committerEduardo Pedroni <e.pedroni91@gmail.com>2014-10-18 15:21:45 +0200
commit4f26361eb08aa09334d1eea0a124110c20d809ce (patch)
treeea2652193f376eee5c9c44776895378b123be7c8 /doc/jcgp/gui/population
parentfc0f9ce2aa46444ff69e89e9b9e09f3610eedd74 (diff)
Moved javadocs to a different repository for hosting, updated README
Diffstat (limited to 'doc/jcgp/gui/population')
-rw-r--r--doc/jcgp/gui/population/ChromosomePane.html495
-rw-r--r--doc/jcgp/gui/population/FunctionSelector.html414
-rw-r--r--doc/jcgp/gui/population/GUIGene.GUIGeneState.html429
-rw-r--r--doc/jcgp/gui/population/GUIGene.html630
-rw-r--r--doc/jcgp/gui/population/GUIInput.html566
-rw-r--r--doc/jcgp/gui/population/GUINode.html614
-rw-r--r--doc/jcgp/gui/population/GUIOutput.html591
-rw-r--r--doc/jcgp/gui/population/PopulationPane.html513
-rw-r--r--doc/jcgp/gui/population/class-use/ChromosomePane.html175
-rw-r--r--doc/jcgp/gui/population/class-use/FunctionSelector.html124
-rw-r--r--doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html220
-rw-r--r--doc/jcgp/gui/population/class-use/GUIGene.html197
-rw-r--r--doc/jcgp/gui/population/class-use/GUIInput.html124
-rw-r--r--doc/jcgp/gui/population/class-use/GUINode.html191
-rw-r--r--doc/jcgp/gui/population/class-use/GUIOutput.html124
-rw-r--r--doc/jcgp/gui/population/class-use/PopulationPane.html164
-rw-r--r--doc/jcgp/gui/population/package-frame.html30
-rw-r--r--doc/jcgp/gui/population/package-summary.html187
-rw-r--r--doc/jcgp/gui/population/package-tree.html194
-rw-r--r--doc/jcgp/gui/population/package-use.html191
20 files changed, 0 insertions, 6173 deletions
diff --git a/doc/jcgp/gui/population/ChromosomePane.html b/doc/jcgp/gui/population/ChromosomePane.html
deleted file mode 100644
index 4904373..0000000
--- a/doc/jcgp/gui/population/ChromosomePane.html
+++ /dev/null
@@ -1,495 +0,0 @@
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-<title>ChromosomePane</title>
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-<script type="text/javascript" src="../../../script.js"></script>
-</head>
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-<h2 title="Class ChromosomePane" class="title">Class ChromosomePane</h2>
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-<li>java.lang.Object</li>
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-<pre>public class <span class="typeNameLabel">ChromosomePane</span>
-extends javafx.scene.control.ScrollPane</pre>
-<div class="block">This extension of <code>ScrollPane</code> contains a series of
- nodes, inputs and outputs spread across a grid. It also contains
- all of the connection lines overlaid over the nodes, inputs and outputs.</div>
-<dl>
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-<th class="colOne" scope="col">Constructor and Description</th>
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-<tr class="altColor">
-<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#ChromosomePane-jcgp.backend.population.Chromosome-jcgp.gui.GUI-jcgp.gui.population.PopulationPane-">ChromosomePane</a></span>(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- <a href="../../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a>&nbsp;gui,
- <a href="../../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population">PopulationPane</a>&nbsp;parent)</code>&nbsp;</td>
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-<td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#isEvaluating--">isEvaluating</a></span>()</code>&nbsp;</td>
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-<tr id="i1" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#relockOutputs--">relockOutputs</a></span>()</code>&nbsp;</td>
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-<tr id="i2" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#setInputs-java.lang.Object:A-">setInputs</a></span>(java.lang.Object[]&nbsp;values)</code>&nbsp;</td>
-</tr>
-<tr id="i3" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#unlockOutputs--">unlockOutputs</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i4" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#updateGenes-jcgp.backend.population.Chromosome-">updateGenes</a></span>(<a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chr)</code>&nbsp;</td>
-</tr>
-<tr id="i5" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/ChromosomePane.html#updateValues--">updateValues</a></span>()</code>&nbsp;</td>
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getOnMouseDragEntered, getOnMouseDragExited, getOnMouseDragged, getOnMouseDragOver, getOnMouseDragReleased, getOnMouseEntered, getOnMouseExited, getOnMouseMoved, getOnMousePressed, getOnMouseReleased, getOnRotate, getOnRotationFinished, getOnRotationStarted, getOnScroll, getOnScrollFinished, getOnScrollStarted, getOnSwipeDown, getOnSwipeLeft, getOnSwipeRight, getOnSwipeUp, getOnTouchMoved, getOnTouchPressed, getOnTouchReleased, getOnTouchStationary, getOnZoom, getOnZoomFinished, getOnZoomStarted, getOpacity, getParent, getProperties, getPseudoClassStates, getRotate, getRotationAxis, getScaleX, getScaleY, getScaleZ, getScene, getStyle, getStyleableParent, getStyleClass, getTransforms, getTranslateX, getTranslateY, getTranslateZ, getTypeSelector, getUserData, hasProperties, hoverProperty, idProperty, impl_getAccessible, impl_getLeafTransform, impl_getMatchingStyles, impl_getPeer, impl_getPivotX, impl_getPivotY, impl_getPivotZ, impl_getStyleMap, impl_hasTransforms, impl_isShowMnemonics, 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diff --git a/doc/jcgp/gui/population/FunctionSelector.html b/doc/jcgp/gui/population/FunctionSelector.html
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diff --git a/doc/jcgp/gui/population/GUIGene.GUIGeneState.html b/doc/jcgp/gui/population/GUIGene.GUIGeneState.html
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diff --git a/doc/jcgp/gui/population/GUIGene.html b/doc/jcgp/gui/population/GUIGene.html
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUIInput.html#getChangingConnection--">getChangingConnection</a></span>()</code>&nbsp;</td>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUIInput.html#resetState--">resetState</a></span>()</code>&nbsp;</td>
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diff --git a/doc/jcgp/gui/population/GUINode.html b/doc/jcgp/gui/population/GUINode.html
deleted file mode 100644
index e8769a3..0000000
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-<div class="subTitle">jcgp.gui.population</div>
-<h2 title="Class GUINode" class="title">Class GUINode</h2>
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-<li>java.lang.Object</li>
-<li>
-<ul class="inheritance">
-<li>javafx.scene.Node</li>
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-<ul class="inheritance">
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-<ul class="inheritance">
-<li>javafx.scene.Group</li>
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- javafx.scene.shape.Line[]&nbsp;connectionLines,
- <a href="../../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a>&nbsp;gui)</code>&nbsp;</td>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#getChangingConnection--">getChangingConnection</a></span>()</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
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-<td class="colFirst"><code>void</code></td>
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-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#setChangingConnection-jcgp.backend.population.Connection-">setChangingConnection</a></span>(<a href="../../../jcgp/backend/population/Connection.html" title="interface in jcgp.backend.population">Connection</a>&nbsp;newConnection)</code>&nbsp;</td>
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-<tr id="i6" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine</a></span>(<a href="../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a>&nbsp;gene)</code>&nbsp;</td>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#setConnectionStates-jcgp.gui.population.GUIGene.GUIGeneState-">setConnectionStates</a></span>(<a href="../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState</a></span>(<a href="../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#updateLine-int-">updateLine</a></span>(int&nbsp;index)</code>
-<div class="block">Place the end of the specified line on the output of the associated connection.</div>
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-<tr id="i12" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#updateLines--">updateLines</a></span>()</code>
-<div class="block">Updates the end of all lines to match the associated connections.</div>
-</td>
-</tr>
-<tr id="i13" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/gui/population/GUINode.html#updateText--">updateText</a></span>()</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
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diff --git a/doc/jcgp/gui/population/PopulationPane.html b/doc/jcgp/gui/population/PopulationPane.html
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getOnMouseDragEntered, getOnMouseDragExited, getOnMouseDragged, getOnMouseDragOver, getOnMouseDragReleased, getOnMouseEntered, getOnMouseExited, getOnMouseMoved, getOnMousePressed, getOnMouseReleased, getOnRotate, getOnRotationFinished, getOnRotationStarted, getOnScroll, getOnScrollFinished, getOnScrollStarted, getOnSwipeDown, getOnSwipeLeft, getOnSwipeRight, getOnSwipeUp, getOnTouchMoved, getOnTouchPressed, getOnTouchReleased, getOnTouchStationary, getOnZoom, getOnZoomFinished, getOnZoomStarted, getOpacity, getParent, getProperties, getPseudoClassStates, getRotate, getRotationAxis, getScaleX, getScaleY, getScaleZ, getScene, getStyle, getStyleableParent, getStyleClass, getTransforms, getTranslateX, getTranslateY, getTranslateZ, getTypeSelector, getUserData, hasProperties, hoverProperty, idProperty, impl_getAccessible, impl_getLeafTransform, impl_getMatchingStyles, impl_getPeer, impl_getPivotX, impl_getPivotY, impl_getPivotZ, impl_getStyleMap, impl_hasTransforms, impl_isShowMnemonics, 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onInputMethodTextChangedProperty, onKeyPressedProperty, onKeyReleasedProperty, onKeyTypedProperty, onMouseClickedProperty, onMouseDragEnteredProperty, onMouseDragExitedProperty, onMouseDraggedProperty, onMouseDragOverProperty, onMouseDragReleasedProperty, onMouseEnteredProperty, onMouseExitedProperty, onMouseMovedProperty, onMousePressedProperty, onMouseReleasedProperty, onRotateProperty, onRotationFinishedProperty, onRotationStartedProperty, onScrollFinishedProperty, onScrollProperty, onScrollStartedProperty, onSwipeDownProperty, onSwipeLeftProperty, onSwipeRightProperty, onSwipeUpProperty, onTouchMovedProperty, onTouchPressedProperty, onTouchReleasedProperty, onTouchStationaryProperty, onZoomFinishedProperty, onZoomProperty, onZoomStartedProperty, opacityProperty, parentProperty, parentToLocal, parentToLocal, parentToLocal, parentToLocal, parentToLocal, pickOnBoundsProperty, pressedProperty, pseudoClassStateChanged, relocate, removeEventFilter, removeEventHandler, requestFocus, resizeRelocate, rotateProperty, rotationAxisProperty, scaleXProperty, scaleYProperty, scaleZProperty, sceneProperty, sceneToLocal, sceneToLocal, sceneToLocal, sceneToLocal, sceneToLocal, screenToLocal, screenToLocal, screenToLocal, setBlendMode, setCache, setCacheHint, setClip, setCursor, setDepthTest, setDisable, setEffect, setEventDispatcher, setFocusTraversable, setId, setInputMethodRequests, setLayoutX, setLayoutY, setManaged, setMouseTransparent, setNodeOrientation, setOnContextMenuRequested, setOnDragDetected, setOnDragDone, setOnDragDropped, setOnDragEntered, setOnDragExited, setOnDragOver, setOnInputMethodTextChanged, setOnKeyPressed, setOnKeyReleased, setOnKeyTyped, setOnMouseClicked, setOnMouseDragEntered, setOnMouseDragExited, setOnMouseDragged, setOnMouseDragOver, setOnMouseDragReleased, setOnMouseEntered, setOnMouseExited, setOnMouseMoved, setOnMousePressed, setOnMouseReleased, setOnRotate, setOnRotationFinished, setOnRotationStarted, setOnScroll, setOnScrollFinished, setOnScrollStarted, setOnSwipeDown, setOnSwipeLeft, setOnSwipeRight, setOnSwipeUp, setOnTouchMoved, setOnTouchPressed, setOnTouchReleased, setOnTouchStationary, setOnZoom, setOnZoomFinished, setOnZoomStarted, setOpacity, setPickOnBounds, setRotate, setRotationAxis, setScaleX, setScaleY, setScaleZ, setStyle, setTranslateX, setTranslateY, setTranslateZ, setUserData, setVisible, snapshot, snapshot, startDragAndDrop, startFullDrag, styleProperty, toBack, toFront, toString, translateXProperty, translateYProperty, translateZProperty, usesMirroring, visibleProperty</code></li>
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-<h4>PopulationPane</h4>
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-<pre>public&nbsp;void&nbsp;setEvaluating(boolean&nbsp;value)</pre>
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diff --git a/doc/jcgp/gui/population/class-use/ChromosomePane.html b/doc/jcgp/gui/population/class-use/ChromosomePane.html
deleted file mode 100644
index add9624..0000000
--- a/doc/jcgp/gui/population/class-use/ChromosomePane.html
+++ /dev/null
@@ -1,175 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>Uses of Class jcgp.gui.population.ChromosomePane</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../../script.js"></script>
-</head>
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-<script type="text/javascript"><!--
- try {
- if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="Uses of Class jcgp.gui.population.ChromosomePane";
- }
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- }
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-<h2 title="Uses of Class jcgp.gui.population.ChromosomePane" class="title">Uses of Class<br>jcgp.gui.population.ChromosomePane</h2>
-</div>
-<div class="classUseContainer">
-<ul class="blockList">
-<li class="blockList">
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
-<caption><span>Packages that use <a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Package</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.gui.population">jcgp.gui.population</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
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-</li>
-<li class="blockList">
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-<h3>Uses of <a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a> in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing constructors, and an explanation">
-<caption><span>Constructors in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> with parameters of type <a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colOne" scope="col">Constructor and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIInput.html#GUIInput-jcgp.gui.population.ChromosomePane-jcgp.backend.population.Input-">GUIInput</a></span>(<a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a>&nbsp;parentRef,
- <a href="../../../../jcgp/backend/population/Input.html" title="class in jcgp.backend.population">Input</a>&nbsp;input)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUINode.html#GUINode-jcgp.gui.population.ChromosomePane-jcgp.backend.population.Node-javafx.scene.shape.Line:A-jcgp.gui.GUI-">GUINode</a></span>(<a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a>&nbsp;parentRef,
- <a href="../../../../jcgp/backend/population/Node.html" title="class in jcgp.backend.population">Node</a>&nbsp;node,
- javafx.scene.shape.Line[]&nbsp;connectionLines,
- <a href="../../../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a>&nbsp;gui)</code>&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIOutput.html#GUIOutput-jcgp.gui.population.ChromosomePane-jcgp.backend.population.Output-javafx.scene.shape.Line-jcgp.gui.GUI-">GUIOutput</a></span>(<a href="../../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a>&nbsp;parentRef,
- <a href="../../../../jcgp/backend/population/Output.html" title="class in jcgp.backend.population">Output</a>&nbsp;output,
- javafx.scene.shape.Line&nbsp;line,
- <a href="../../../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a>&nbsp;gui)</code>&nbsp;</td>
-</tr>
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diff --git a/doc/jcgp/gui/population/class-use/FunctionSelector.html b/doc/jcgp/gui/population/class-use/FunctionSelector.html
deleted file mode 100644
index 15a596e..0000000
--- a/doc/jcgp/gui/population/class-use/FunctionSelector.html
+++ /dev/null
@@ -1,124 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>Uses of Class jcgp.gui.population.FunctionSelector</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
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-</head>
-<body>
-<script type="text/javascript"><!--
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- parent.document.title="Uses of Class jcgp.gui.population.FunctionSelector";
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diff --git a/doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html b/doc/jcgp/gui/population/class-use/GUIGene.GUIGeneState.html
deleted file mode 100644
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-<ul class="blockList">
-<li class="blockList">
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
-<caption><span>Packages that use <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Package</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.gui.population">jcgp.gui.population</a></td>
-<td class="colLast">&nbsp;</td>
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-<h3>Uses of <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a> in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> that return <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code><a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.html#getState--">getState</a></span>()</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>static <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.GUIGeneState.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html#valueOf-java.lang.String-">valueOf</a></span>(java.lang.String&nbsp;name)</code>
-<div class="block">Returns the enum constant of this type with the specified name.</div>
-</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>static <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>[]</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.GUIGeneState.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html#values--">values</a></span>()</code>
-<div class="block">Returns an array containing the constants of this enum type, in
-the order they are declared.</div>
-</td>
-</tr>
-</tbody>
-</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> with parameters of type <a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUINode.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUINode.html#setConnectionStates-jcgp.gui.population.GUIGene.GUIGeneState-">setConnectionStates</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIInput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIInput.html#setConnectionStates-jcgp.gui.population.GUIGene.GUIGeneState-">setConnectionStates</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>
-<div class="block">Set all connections to a given state.</div>
-</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIOutput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIOutput.html#setConnectionStates-jcgp.gui.population.GUIGene.GUIGeneState-">setConnectionStates</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>abstract void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.html#setConnectionStates-jcgp.gui.population.GUIGene.GUIGeneState-">setConnectionStates</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUINode.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUINode.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIInput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIInput.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIOutput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIOutput.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.html#setState-jcgp.gui.population.GUIGene.GUIGeneState-">setState</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a>&nbsp;newState)</code>&nbsp;</td>
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diff --git a/doc/jcgp/gui/population/class-use/GUIGene.html b/doc/jcgp/gui/population/class-use/GUIGene.html
deleted file mode 100644
index 32874c8..0000000
--- a/doc/jcgp/gui/population/class-use/GUIGene.html
+++ /dev/null
@@ -1,197 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
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-<li class="blockList">
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
-<caption><span>Packages that use <a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Package</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.gui.population">jcgp.gui.population</a></td>
-<td class="colLast">&nbsp;</td>
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-<h3>Uses of <a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a> in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing subclasses, and an explanation">
-<caption><span>Subclasses of <a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a> in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Class and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIInput.html" title="class in jcgp.gui.population">GUIInput</a></span></code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></span></code>&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></span></code>&nbsp;</td>
-</tr>
-</tbody>
-</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> with parameters of type <a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUINode.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUINode.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a>&nbsp;gene)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIInput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIInput.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a>&nbsp;gene)</code>&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIOutput.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIOutput.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a>&nbsp;gene)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>abstract void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUIGene.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/GUIGene.html#setConnectionLine-jcgp.gui.population.GUIGene-">setConnectionLine</a></span>(<a href="../../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a>&nbsp;gene)</code>&nbsp;</td>
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+++ /dev/null
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diff --git a/doc/jcgp/gui/population/class-use/GUINode.html b/doc/jcgp/gui/population/class-use/GUINode.html
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-<tr>
-<th class="colFirst" scope="col">Package</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.gui">jcgp.gui</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="#jcgp.gui.population">jcgp.gui.population</a></td>
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-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/gui/package-summary.html">jcgp.gui</a> with parameters of type <a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">GUI.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/GUI.html#bringFunctionSelector-javafx.scene.input.MouseEvent-jcgp.gui.population.GUINode-">bringFunctionSelector</a></span>(javafx.scene.input.MouseEvent&nbsp;event,
- <a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a>&nbsp;node)</code>
-<div class="block">Relocate the function selector to the right position
- relative to the specified node and set it visible.</div>
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-<h3>Uses of <a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a> in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> with parameters of type <a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">FunctionSelector.</span><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/FunctionSelector.html#relocateAndShow-javafx.scene.input.MouseEvent-jcgp.gui.population.GUINode-">relocateAndShow</a></span>(javafx.scene.input.MouseEvent&nbsp;event,
- <a href="../../../../jcgp/gui/population/GUINode.html" title="class in jcgp.gui.population">GUINode</a>&nbsp;node)</code>&nbsp;</td>
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diff --git a/doc/jcgp/gui/population/class-use/GUIOutput.html b/doc/jcgp/gui/population/class-use/GUIOutput.html
deleted file mode 100644
index fefc469..0000000
--- a/doc/jcgp/gui/population/class-use/GUIOutput.html
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diff --git a/doc/jcgp/gui/population/class-use/PopulationPane.html b/doc/jcgp/gui/population/class-use/PopulationPane.html
deleted file mode 100644
index 7b6ab4a..0000000
--- a/doc/jcgp/gui/population/class-use/PopulationPane.html
+++ /dev/null
@@ -1,164 +0,0 @@
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-<caption><span>Constructors in <a href="../../../../jcgp/gui/population/package-summary.html">jcgp.gui.population</a> with parameters of type <a href="../../../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population">PopulationPane</a></span><span class="tabEnd">&nbsp;</span></caption>
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-<th class="colOne" scope="col">Constructor and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/population/ChromosomePane.html#ChromosomePane-jcgp.backend.population.Chromosome-jcgp.gui.GUI-jcgp.gui.population.PopulationPane-">ChromosomePane</a></span>(<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- <a href="../../../../jcgp/gui/GUI.html" title="class in jcgp.gui">GUI</a>&nbsp;gui,
- <a href="../../../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population">PopulationPane</a>&nbsp;parent)</code>&nbsp;</td>
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-<li class="navBarCell1Rev">Use</li>
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diff --git a/doc/jcgp/gui/population/package-frame.html b/doc/jcgp/gui/population/package-frame.html
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-<!-- NewPage -->
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-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>jcgp.gui.population</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
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-<h1 class="bar"><a href="../../../jcgp/gui/population/package-summary.html" target="classFrame">jcgp.gui.population</a></h1>
-<div class="indexContainer">
-<h2 title="Classes">Classes</h2>
-<ul title="Classes">
-<li><a href="ChromosomePane.html" title="class in jcgp.gui.population" target="classFrame">ChromosomePane</a></li>
-<li><a href="FunctionSelector.html" title="class in jcgp.gui.population" target="classFrame">FunctionSelector</a></li>
-<li><a href="GUIGene.html" title="class in jcgp.gui.population" target="classFrame">GUIGene</a></li>
-<li><a href="GUIInput.html" title="class in jcgp.gui.population" target="classFrame">GUIInput</a></li>
-<li><a href="GUINode.html" title="class in jcgp.gui.population" target="classFrame">GUINode</a></li>
-<li><a href="GUIOutput.html" title="class in jcgp.gui.population" target="classFrame">GUIOutput</a></li>
-<li><a href="PopulationPane.html" title="class in jcgp.gui.population" target="classFrame">PopulationPane</a></li>
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-<h2 title="Enums">Enums</h2>
-<ul title="Enums">
-<li><a href="GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population" target="classFrame">GUIGene.GUIGeneState</a></li>
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diff --git a/doc/jcgp/gui/population/package-summary.html b/doc/jcgp/gui/population/package-summary.html
deleted file mode 100644
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-<meta name="date" content="2014-05-22">
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-<script type="text/javascript"><!--
- try {
- if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="jcgp.gui.population";
- }
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- }
-//-->
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-<noscript>
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-<tr>
-<th class="colFirst" scope="col">Class</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population">ChromosomePane</a></td>
-<td class="colLast">
-<div class="block">This extension of <code>ScrollPane</code> contains a series of
- nodes, inputs and outputs spread across a grid.</div>
-</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/FunctionSelector.html" title="class in jcgp.gui.population">FunctionSelector</a></td>
-<td class="colLast">
-<div class="block">A menu class, exposes all of the allowed functions
- when called by a node, so that the node function can be changed.</div>
-</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population">GUIGene</a></td>
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-<tr class="altColor">
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-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/GUIOutput.html" title="class in jcgp.gui.population">GUIOutput</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population">PopulationPane</a></td>
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-<tr>
-<th class="colFirst" scope="col">Enum</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population">GUIGene.GUIGeneState</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
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diff --git a/doc/jcgp/gui/population/package-tree.html b/doc/jcgp/gui/population/package-tree.html
deleted file mode 100644
index d791b58..0000000
--- a/doc/jcgp/gui/population/package-tree.html
+++ /dev/null
@@ -1,194 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>jcgp.gui.population Class Hierarchy</title>
-<meta name="date" content="2014-05-22">
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-<span class="packageHierarchyLabel">Package Hierarchies:</span>
-<ul class="horizontal">
-<li><a href="../../../overview-tree.html">All Packages</a></li>
-</ul>
-</div>
-<div class="contentContainer">
-<h2 title="Class Hierarchy">Class Hierarchy</h2>
-<ul>
-<li type="circle">java.lang.Object
-<ul>
-<li type="circle">javafx.scene.Node (implements javafx.event.EventTarget, javafx.css.Styleable)
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-<li type="circle">javafx.scene.Parent
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-<ul>
-<li type="circle">jcgp.gui.population.<a href="../../../jcgp/gui/population/GUIGene.html" title="class in jcgp.gui.population"><span class="typeNameLink">GUIGene</span></a>
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-<ul>
-<li type="circle">javafx.scene.control.ScrollPane
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-<li type="circle">jcgp.gui.population.<a href="../../../jcgp/gui/population/ChromosomePane.html" title="class in jcgp.gui.population"><span class="typeNameLink">ChromosomePane</span></a></li>
-</ul>
-</li>
-<li type="circle">javafx.scene.control.TabPane
-<ul>
-<li type="circle">jcgp.gui.population.<a href="../../../jcgp/gui/population/PopulationPane.html" title="class in jcgp.gui.population"><span class="typeNameLink">PopulationPane</span></a></li>
-</ul>
-</li>
-</ul>
-</li>
-<li type="circle">javafx.scene.layout.Pane
-<ul>
-<li type="circle">javafx.scene.layout.VBox
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-</ul>
-</li>
-</ul>
-</li>
-</ul>
-</li>
-</ul>
-</li>
-</ul>
-</li>
-</ul>
-<h2 title="Enum Hierarchy">Enum Hierarchy</h2>
-<ul>
-<li type="circle">java.lang.Object
-<ul>
-<li type="circle">java.lang.Enum&lt;E&gt; (implements java.lang.Comparable&lt;T&gt;, java.io.Serializable)
-<ul>
-<li type="circle">jcgp.gui.population.<a href="../../../jcgp/gui/population/GUIGene.GUIGeneState.html" title="enum in jcgp.gui.population"><span class="typeNameLink">GUIGene.GUIGeneState</span></a></li>
-</ul>
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diff --git a/doc/jcgp/gui/population/package-use.html b/doc/jcgp/gui/population/package-use.html
deleted file mode 100644
index 9f9d69c..0000000
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-<title>Uses of Package jcgp.gui.population</title>
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-<td class="colOne"><a href="../../../jcgp/gui/population/class-use/ChromosomePane.html#jcgp.gui.population">ChromosomePane</a>
-<div class="block">This extension of <code>ScrollPane</code> contains a series of
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