<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> <!-- NewPage --> <html lang="en"> <head> <!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:04 BST 2014 --> <title>ChromosomeParser</title> <meta name="date" content="2014-05-06"> <link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> <script type="text/javascript" src="../../../script.js"></script> </head> <body> <script type="text/javascript"><!-- try { if (location.href.indexOf('is-external=true') == -1) { parent.document.title="ChromosomeParser"; } } catch(err) { } //--> var methods = {"i0":9,"i1":9}; var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]}; var altColor = "altColor"; var rowColor = "rowColor"; var tableTab = "tableTab"; var activeTableTab = "activeTableTab"; </script> <noscript> <div>JavaScript is disabled on your browser.</div> </noscript> <!-- ========= START OF TOP NAVBAR ======= --> <div 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======== START OF CLASS DATA ======== --> <div class="header"> <div class="subTitle">jcgp.backend.parsers</div> <h2 title="Class ChromosomeParser" class="title">Class ChromosomeParser</h2> </div> <div class="contentContainer"> <ul class="inheritance"> <li>java.lang.Object</li> <li> <ul class="inheritance"> <li>jcgp.backend.parsers.ChromosomeParser</li> </ul> </li> </ul> <div class="description"> <ul class="blockList"> <li class="blockList"> <hr> <br> <pre>public abstract class <span class="typeNameLabel">ChromosomeParser</span> extends java.lang.Object</pre> <div class="block">This class contains a method for parsing .chr files and another for writing .chr files from given chromosomes.</div> <dl> <dt><span class="simpleTagLabel">Author:</span></dt> <dd>Eduardo Pedroni</dd> </dl> </li> </ul> </div> <div class="summary"> <ul class="blockList"> <li class="blockList"> <!-- ======== CONSTRUCTOR SUMMARY ======== --> <ul class="blockList"> <li class="blockList"><a name="constructor.summary"> <!-- --> </a> <h3>Constructor Summary</h3> <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> <caption><span>Constructors</span><span class="tabEnd"> </span></caption> <tr> <th class="colOne" scope="col">Constructor and Description</th> </tr> <tr class="altColor"> <td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#ChromosomeParser--">ChromosomeParser</a></span>()</code> </td> </tr> </table> </li> </ul> <!-- ========== METHOD SUMMARY =========== --> <ul class="blockList"> <li class="blockList"><a name="method.summary"> <!-- --> </a> <h3>Method Summary</h3> <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> <caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> <tr> <th class="colFirst" scope="col">Modifier and Type</th> <th class="colLast" scope="col">Method and Description</th> </tr> <tr id="i0" class="altColor"> <td class="colFirst"><code>static void</code></td> <td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#parse-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">parse</a></span>(java.io.File file, <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</code> <div class="block">Use this method to parse .chr files into a given chromosome.</div> </td> </tr> <tr id="i1" class="rowColor"> <td class="colFirst"><code>static void</code></td> <td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File file, <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</code> <div class="block">Writes a chromosome into the specified .chr file.</div> </td> </tr> </table> <ul class="blockList"> <li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> <!-- --> </a> <h3>Methods inherited from class java.lang.Object</h3> <code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> </ul> </li> </ul> </li> </ul> </div> <div class="details"> <ul class="blockList"> <li class="blockList"> <!-- ========= CONSTRUCTOR DETAIL ======== --> <ul class="blockList"> <li class="blockList"><a name="constructor.detail"> <!-- --> </a> <h3>Constructor Detail</h3> <a name="ChromosomeParser--"> <!-- --> </a> <ul class="blockListLast"> <li class="blockList"> <h4>ChromosomeParser</h4> <pre>public ChromosomeParser()</pre> </li> </ul> </li> </ul> <!-- ============ METHOD DETAIL ========== --> <ul class="blockList"> <li class="blockList"><a name="method.detail"> <!-- --> </a> <h3>Method Detail</h3> <a name="parse-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-"> <!-- --> </a> <ul class="blockList"> <li class="blockList"> <h4>parse</h4> <pre>public static void parse(java.io.File file, <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</pre> <div class="block">Use this method to parse .chr files into a given chromosome. <br><br> This is not fully defensive as it doesn't check for number of inputs, doesn't compare rows and columns individually and doesn't account for levels back. It is not viable to implement these defensive measures with the chromosome format used by CGP.</div> <dl> <dt><span class="paramLabel">Parameters:</span></dt> <dd><code>file</code> - the .chr file to parse from</dd> <dd><code>chromosome</code> - the chromosome to configure</dd> <dd><code>resources</code> - the experiment resources</dd> </dl> </li> </ul> <a name="save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-"> <!-- --> </a> <ul class="blockListLast"> <li class="blockList"> <h4>save</h4> <pre>public static void save(java.io.File file, <a href="../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a> chromosome, <a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> resources)</pre> <div class="block">Writes a chromosome into the specified .chr file. <br><br> The file is written in the standard .chr format and can be read by the original CGP implementation.</div> <dl> <dt><span class="paramLabel">Parameters:</span></dt> <dd><code>file</code> - the file to write to</dd> <dd><code>chromosome</code> - the chromosome to save</dd> <dd><code>resources</code> - a reference to the experiment's resources.</dd> </dl> </li> </ul> </li> </ul> </li> </ul> </div> </div> <!-- ========= END OF CLASS DATA ========= --> <!-- ======= START OF BOTTOM NAVBAR ====== --> <div class="bottomNav"><a name="navbar.bottom"> <!-- --> </a> <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> <a name="navbar.bottom.firstrow"> <!-- --> </a> <ul class="navList" title="Navigation"> <li><a href="../../../overview-summary.html">Overview</a></li> <li><a href="package-summary.html">Package</a></li> <li class="navBarCell1Rev">Class</li> <li><a href="class-use/ChromosomeParser.html">Use</a></li> <li><a href="package-tree.html">Tree</a></li> <li><a href="../../../deprecated-list.html">Deprecated</a></li> <li><a href="../../../index-files/index-1.html">Index</a></li> <li><a href="../../../help-doc.html">Help</a></li> </ul> </div> <div class="subNav"> <ul class="navList"> <li>Prev Class</li> <li><a href="../../../jcgp/backend/parsers/FunctionParser.html" title="class in jcgp.backend.parsers"><span class="typeNameLink">Next Class</span></a></li> </ul> <ul class="navList"> <li><a href="../../../index.html?jcgp/backend/parsers/ChromosomeParser.html" target="_top">Frames</a></li> <li><a href="ChromosomeParser.html" target="_top">No Frames</a></li> </ul> <ul class="navList" id="allclasses_navbar_bottom"> <li><a href="../../../allclasses-noframe.html">All Classes</a></li> </ul> <div> <script type="text/javascript"><!-- allClassesLink = document.getElementById("allclasses_navbar_bottom"); if(window==top) { allClassesLink.style.display = "block"; } else { allClassesLink.style.display = "none"; } //--> </script> </div> <div> <ul class="subNavList"> <li>Summary: </li> <li>Nested | </li> <li>Field | </li> <li><a href="#constructor.summary">Constr</a> | </li> <li><a href="#method.summary">Method</a></li> </ul> <ul class="subNavList"> <li>Detail: </li> <li>Field | </li> <li><a href="#constructor.detail">Constr</a> | </li> <li><a href="#method.detail">Method</a></li> </ul> </div> <a name="skip.navbar.bottom"> <!-- --> </a></div> <!-- ======== END OF BOTTOM NAVBAR ======= --> </body> </html>