From 4f26361eb08aa09334d1eea0a124110c20d809ce Mon Sep 17 00:00:00 2001 From: Eduardo Pedroni Date: Sat, 18 Oct 2014 15:21:45 +0200 Subject: Moved javadocs to a different repository for hosting, updated README --- doc/jcgp/backend/parsers/ChromosomeParser.html | 349 --------------------- doc/jcgp/backend/parsers/FunctionParser.html | 301 ------------------ doc/jcgp/backend/parsers/ParameterParser.html | 294 ----------------- doc/jcgp/backend/parsers/TestCaseParser.html | 296 ----------------- .../parsers/class-use/ChromosomeParser.html | 124 -------- .../backend/parsers/class-use/FunctionParser.html | 124 -------- .../backend/parsers/class-use/ParameterParser.html | 124 -------- .../backend/parsers/class-use/TestCaseParser.html | 124 -------- doc/jcgp/backend/parsers/package-frame.html | 23 -- doc/jcgp/backend/parsers/package-summary.html | 166 ---------- doc/jcgp/backend/parsers/package-tree.html | 140 --------- doc/jcgp/backend/parsers/package-use.html | 124 -------- 12 files changed, 2189 deletions(-) delete mode 100644 doc/jcgp/backend/parsers/ChromosomeParser.html delete mode 100644 doc/jcgp/backend/parsers/FunctionParser.html delete mode 100644 doc/jcgp/backend/parsers/ParameterParser.html delete mode 100644 doc/jcgp/backend/parsers/TestCaseParser.html delete mode 100644 doc/jcgp/backend/parsers/class-use/ChromosomeParser.html delete mode 100644 doc/jcgp/backend/parsers/class-use/FunctionParser.html delete mode 100644 doc/jcgp/backend/parsers/class-use/ParameterParser.html delete mode 100644 doc/jcgp/backend/parsers/class-use/TestCaseParser.html delete mode 100644 doc/jcgp/backend/parsers/package-frame.html delete mode 100644 doc/jcgp/backend/parsers/package-summary.html delete mode 100644 doc/jcgp/backend/parsers/package-tree.html delete mode 100644 doc/jcgp/backend/parsers/package-use.html (limited to 'doc/jcgp/backend/parsers') diff --git a/doc/jcgp/backend/parsers/ChromosomeParser.html b/doc/jcgp/backend/parsers/ChromosomeParser.html deleted file mode 100644 index 392ad48..0000000 --- a/doc/jcgp/backend/parsers/ChromosomeParser.html +++ /dev/null @@ -1,349 +0,0 @@ - - - - - -ChromosomeParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - -
-
jcgp.backend.parsers
-

Class ChromosomeParser

-
-
- -
-
    -
  • -
    -
    -
    public abstract class ChromosomeParser
-extends java.lang.Object
    -
    This class contains a method for parsing .chr files and another - for writing .chr files from given chromosomes.
    -
    -
    Author:
    -
    Eduardo Pedroni
    -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Summary

      - - - - - - - - -
      Constructors 
      Constructor and Description
      ChromosomeParser() 
      -
      • -
    - -
      -
    • - - -

      Method Summary

      - - - - - - - - - - - - - - - - - - -
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static voidparse(java.io.File file, - Chromosome chromosome, - Resources resources) -
      Use this method to parse .chr files into a given chromosome.
      -
      static voidprint(Chromosome chromosome, - Resources resources) -
      Writes a chromosome to the console in .chr format.
      -
      static voidsave(java.io.File file, - Chromosome chromosome, - Resources resources) -
      Writes a chromosome into the specified .chr file.
      -
      -
        -
      • - - -

        Methods inherited from class java.lang.Object

        -equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • -
      -
      • -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Detail

      - - - -
        -
      • -

        ChromosomeParser

        -
        public ChromosomeParser()
        -
        • -
      -
      • -
    - -
      -
    • - - -

      Method Detail

      - - - -
        -
      • -

        parse

        -
        public static void parse(java.io.File file,
-                         Chromosome chromosome,
-                         Resources resources)
        -
        Use this method to parse .chr files into a given chromosome. -

        - This is not fully defensive as it doesn't check for number of inputs, - doesn't compare rows and columns individually and doesn't account for levels back. It - is not viable to implement these defensive measures with the chromosome format used - by CGP.
        -
        -
        Parameters:
        -
        file - the .chr file to parse from.
        -
        chromosome - the chromosome to configure.
        -
        resources - the experiment resources.
        -
        -
        • -
      - - - -
        -
      • -

        save

        -
        public static void save(java.io.File file,
-                        Chromosome chromosome,
-                        Resources resources)
        -
        Writes a chromosome into the specified .chr file. -

        - The file is written in the standard .chr format and can - be read by the original CGP implementation.
        -
        -
        Parameters:
        -
        file - the file to write to.
        -
        chromosome - the chromosome to save.
        -
        resources - a reference to the experiment's resources.
        -
        -
        • -
      - - - -
        -
      • -

        print

        -
        public static void print(Chromosome chromosome,
-                         Resources resources)
        -
        Writes a chromosome to the console in .chr format. Note - that, if using a GUI console, that console must be flushed for the - output to appear.
        -
        -
        Parameters:
        -
        chromosome - the chromosome to save.
        -
        resources - a reference to the experiment's resources.
        -
        -
        • -
      -
      • -
    -
    • -
-
-
- - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/FunctionParser.html b/doc/jcgp/backend/parsers/FunctionParser.html deleted file mode 100644 index 5f741b3..0000000 --- a/doc/jcgp/backend/parsers/FunctionParser.html +++ /dev/null @@ -1,301 +0,0 @@ - - - - - -FunctionParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - -
-
jcgp.backend.parsers
-

Class FunctionParser

-
-
- -
-
    -
  • -
    -
    -
    public abstract class FunctionParser
-extends java.lang.Object
    -
    Contains a static method for parsing functions from a - .par file.
    -
    -
    Author:
    -
    Eduardo Pedroni
    -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Summary

      - - - - - - - - -
      Constructors 
      Constructor and Description
      FunctionParser() 
      -
      • -
    - -
      -
    • - - -

      Method Summary

      - - - - - - - - - - -
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static voidparse(java.io.File file, - FunctionSet functionSet, - Resources resources) -
      Reads the specified file and attempts to enable - and disable the functions in the FunctionSet - accordingly.
      -
      -
        -
      • - - -

        Methods inherited from class java.lang.Object

        -equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • -
      -
      • -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Detail

      - - - -
        -
      • -

        FunctionParser

        -
        public FunctionParser()
        -
        • -
      -
      • -
    - -
      -
    • - - -

      Method Detail

      - - - -
        -
      • -

        parse

        -
        public static void parse(java.io.File file,
-                         FunctionSet functionSet,
-                         Resources resources)
        -
        Reads the specified file and attempts to enable - and disable the functions in the FunctionSet - accordingly. -

        - Standard CGP .par files do not contain enough information - to determine if they match the currently selected function set. - For this reason, the parser assumes the function set is correct - and treats functions by their index rather than their name. Any - index outside the bounds of the function set is ignored and a - warning message is printed once parsing is complete.
        -
        -
        Parameters:
        -
        file - the .par file to parse.
        -
        functionSet - the function set whose functions should be modified.
        -
        resources - used for printing console messages.
        -
        -
        • -
      -
      • -
    -
    • -
-
-
- - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/ParameterParser.html b/doc/jcgp/backend/parsers/ParameterParser.html deleted file mode 100644 index 5ec09a4..0000000 --- a/doc/jcgp/backend/parsers/ParameterParser.html +++ /dev/null @@ -1,294 +0,0 @@ - - - - - -ParameterParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - -
-
jcgp.backend.parsers
-

Class ParameterParser

-
-
- -
-
    -
  • -
    -
    -
    public abstract class ParameterParser
-extends java.lang.Object
    -
    Contains a static method for parsing parameters from a - .par file.
    -
    -
    Author:
    -
    Eduardo Pedroni
    -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Summary

      - - - - - - - - -
      Constructors 
      Constructor and Description
      ParameterParser() 
      -
      • -
    - -
      -
    • - - -

      Method Summary

      - - - - - - - - - - -
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static voidparse(java.io.File file, - ModifiableResources resources) -
      Parses the parameters from a specified CGP parameter file and - modifies the experiment resources appropriately.
      -
      -
        -
      • - - -

        Methods inherited from class java.lang.Object

        -equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • -
      -
      • -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Detail

      - - - -
        -
      • -

        ParameterParser

        -
        public ParameterParser()
        -
        • -
      -
      • -
    - -
      -
    • - - -

      Method Detail

      - - - -
        -
      • -

        parse

        -
        public static void parse(java.io.File file,
-                         ModifiableResources resources)
        -
        Parses the parameters from a specified CGP parameter file and - modifies the experiment resources appropriately. -

        - CGP .par files do not follow a very strict convention, so this - parser does its best to cope with format irregularities. Parsing - works even if the parameters are in the wrong order, and unknown - parameters are simply ignored.
        -
        -
        Parameters:
        -
        file - the .par file to parse.
        -
        resources - a reference to the resources object that must be modified.
        -
        -
        • -
      -
      • -
    -
    • -
-
-
- - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/TestCaseParser.html b/doc/jcgp/backend/parsers/TestCaseParser.html deleted file mode 100644 index 2be670f..0000000 --- a/doc/jcgp/backend/parsers/TestCaseParser.html +++ /dev/null @@ -1,296 +0,0 @@ - - - - - -TestCaseParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - -
-
jcgp.backend.parsers
-

Class TestCaseParser

-
-
- -
-
    -
  • -
    -
    -
    public abstract class TestCaseParser
-extends java.lang.Object
    -
    Contains a static method for parsing values from a - CGP problem data file. The actual file extension - varies from problem to problem, and is therefore - defined in the experiment's Problem instance.
    -
    -
    Author:
    -
    Eduardo Pedroni
    -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Summary

      - - - - - - - - -
      Constructors 
      Constructor and Description
      TestCaseParser() 
      -
      • -
    - -
      -
    • - - -

      Method Summary

      - - - - - - - - - - -
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static voidparse(java.io.File file, - TestCaseProblem<?> problem, - ModifiableResources resources) -
      Sets the number of inputs and outputs in the resources - to match the given file, and parses each test case - from the file into the specified problem.
      -
      -
        -
      • - - -

        Methods inherited from class java.lang.Object

        -equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • -
      -
      • -
    -
    • -
-
-
-
    -
  • - -
      -
    • - - -

      Constructor Detail

      - - - -
        -
      • -

        TestCaseParser

        -
        public TestCaseParser()
        -
        • -
      -
      • -
    - -
      -
    • - - -

      Method Detail

      - - - -
        -
      • -

        parse

        -
        public static void parse(java.io.File file,
-                         TestCaseProblem<?> problem,
-                         ModifiableResources resources)
        -
        Sets the number of inputs and outputs in the resources - to match the given file, and parses each test case - from the file into the specified problem.
        -
        -
        Parameters:
        -
        file - the problem file to parse.
        -
        problem - the problem into which to parse the problem data.
        -
        resources - a modifiable reference to the experiment's resources
        -
        -
        • -
      -
      • -
    -
    • -
-
-
- - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
-
-
    -
  • Summary: 
    • -
  • Nested | 
    • -
  • Field | 
    • -
  • Constr | 
    • -
  • Method
    • -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html b/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html deleted file mode 100644 index ee88d3b..0000000 --- a/doc/jcgp/backend/parsers/class-use/ChromosomeParser.html +++ /dev/null @@ -1,124 +0,0 @@ - - - - - -Uses of Class jcgp.backend.parsers.ChromosomeParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Uses of Class
jcgp.backend.parsers.ChromosomeParser

-
-
No usage of jcgp.backend.parsers.ChromosomeParser
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/class-use/FunctionParser.html b/doc/jcgp/backend/parsers/class-use/FunctionParser.html deleted file mode 100644 index 4e2b7f0..0000000 --- a/doc/jcgp/backend/parsers/class-use/FunctionParser.html +++ /dev/null @@ -1,124 +0,0 @@ - - - - - -Uses of Class jcgp.backend.parsers.FunctionParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Uses of Class
jcgp.backend.parsers.FunctionParser

-
-
No usage of jcgp.backend.parsers.FunctionParser
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/class-use/ParameterParser.html b/doc/jcgp/backend/parsers/class-use/ParameterParser.html deleted file mode 100644 index 70ed7a4..0000000 --- a/doc/jcgp/backend/parsers/class-use/ParameterParser.html +++ /dev/null @@ -1,124 +0,0 @@ - - - - - -Uses of Class jcgp.backend.parsers.ParameterParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Uses of Class
jcgp.backend.parsers.ParameterParser

-
-
No usage of jcgp.backend.parsers.ParameterParser
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/class-use/TestCaseParser.html b/doc/jcgp/backend/parsers/class-use/TestCaseParser.html deleted file mode 100644 index 58e10e2..0000000 --- a/doc/jcgp/backend/parsers/class-use/TestCaseParser.html +++ /dev/null @@ -1,124 +0,0 @@ - - - - - -Uses of Class jcgp.backend.parsers.TestCaseParser - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Uses of Class
jcgp.backend.parsers.TestCaseParser

-
-
No usage of jcgp.backend.parsers.TestCaseParser
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/package-frame.html b/doc/jcgp/backend/parsers/package-frame.html deleted file mode 100644 index 69ad620..0000000 --- a/doc/jcgp/backend/parsers/package-frame.html +++ /dev/null @@ -1,23 +0,0 @@ - - - - - -jcgp.backend.parsers - - - - - -

jcgp.backend.parsers

-
-

Classes

- -
- - diff --git a/doc/jcgp/backend/parsers/package-summary.html b/doc/jcgp/backend/parsers/package-summary.html deleted file mode 100644 index 6e2db83..0000000 --- a/doc/jcgp/backend/parsers/package-summary.html +++ /dev/null @@ -1,166 +0,0 @@ - - - - - -jcgp.backend.parsers - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Package jcgp.backend.parsers

-
-
- -
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/package-tree.html b/doc/jcgp/backend/parsers/package-tree.html deleted file mode 100644 index 330120d..0000000 --- a/doc/jcgp/backend/parsers/package-tree.html +++ /dev/null @@ -1,140 +0,0 @@ - - - - - -jcgp.backend.parsers Class Hierarchy - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Hierarchy For Package jcgp.backend.parsers

-Package Hierarchies: - -
-
-

Class Hierarchy

- -
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - diff --git a/doc/jcgp/backend/parsers/package-use.html b/doc/jcgp/backend/parsers/package-use.html deleted file mode 100644 index f9f80f8..0000000 --- a/doc/jcgp/backend/parsers/package-use.html +++ /dev/null @@ -1,124 +0,0 @@ - - - - - -Uses of Package jcgp.backend.parsers - - - - - - - - -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- -
-

Uses of Package
jcgp.backend.parsers

-
-
No usage of jcgp.backend.parsers
- -
- - -
Skip navigation links
- - - - -
-
- - - -
- -
- - -
- - - -- cgit v1.2.3