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diff --git a/doc/jcgp/backend/statistics/StatisticsLogger.html b/doc/jcgp/backend/statistics/StatisticsLogger.html new file mode 100644 index 0000000..4c80b52 --- /dev/null +++ b/doc/jcgp/backend/statistics/StatisticsLogger.html @@ -0,0 +1,562 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_05) on Tue May 06 14:28:07 BST 2014 --> +<title>StatisticsLogger</title> +<meta name="date" content="2014-05-06"> +<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style"> +<script type="text/javascript" src="../../../script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == -1) { + parent.document.title="StatisticsLogger"; + } + } + catch(err) { + } +//--> +var methods = {"i0":10,"i1":10,"i2":10,"i3":10,"i4":10,"i5":10,"i6":10,"i7":10,"i8":10,"i9":10,"i10":10,"i11":10,"i12":10}; +var tabs = {65535:["t0","All Methods"],2:["t2","Instance Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/StatisticsLogger.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/statistics/RunEntry.html" title="class in jcgp.backend.statistics"><span class="typeNameLink">Prev Class</span></a></li> +<li>Next Class</li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/statistics/StatisticsLogger.html" target="_top">Frames</a></li> +<li><a href="StatisticsLogger.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">jcgp.backend.statistics</div> +<h2 title="Class StatisticsLogger" class="title">Class StatisticsLogger</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li>java.lang.Object</li> +<li> +<ul class="inheritance"> +<li>jcgp.backend.statistics.StatisticsLogger</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<hr> +<br> +<pre>public class <span class="typeNameLabel">StatisticsLogger</span> +extends java.lang.Object</pre> +<div class="block">This is a utility class for logging experiment statistics when doing multiple runs. + <br><br> + Information about each run is added via the <code>logRun()</code> method. The many getters + can be used to obtain statistics about the logged runs, such as success rate and average + fitness. + <br><br> + <code>JCGP</code> uses this class to perform its logging and print out experiment data at the end.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Eduardo Pedroni</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#StatisticsLogger--">StatisticsLogger</a></span>()</code> +<div class="block">Create a new statistics logger, use this when resetting is necessary.</div> +</td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageActiveNodes--">getAverageActiveNodes</a></span>()</code> +<div class="block">Averages the number of active nodes in the + best chromosomes obtained across all runs.</div> +</td> +</tr> +<tr id="i1" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageActiveNodesStdDev--">getAverageActiveNodesStdDev</a></span>()</code> +<div class="block">Calculates the standard deviation of + the number of active nodes in the best solution + in each run.</div> +</td> +</tr> +<tr id="i2" class="altColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageFitness--">getAverageFitness</a></span>()</code> +<div class="block">Averages the best fitness obtained in each run.</div> +</td> +</tr> +<tr id="i3" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageFitnessStdDev--">getAverageFitnessStdDev</a></span>()</code> +<div class="block">Calculates the standard deviation of + the best fitness obtained in each run.</div> +</td> +</tr> +<tr id="i4" class="altColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageGenerations--">getAverageGenerations</a></span>()</code> +<div class="block">Calculates the average generation out of all runs.</div> +</td> +</tr> +<tr id="i5" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageGenerationsStdDev--">getAverageGenerationsStdDev</a></span>()</code> +<div class="block">Calculates the standard deviation of + the average number of generations in + each run.</div> +</td> +</tr> +<tr id="i6" class="altColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageSuccessfulGenerations--">getAverageSuccessfulGenerations</a></span>()</code> +<div class="block">Calculates the average generation out of successful runs only.</div> +</td> +</tr> +<tr id="i7" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getAverageSuccessfulGenerationsStdDev--">getAverageSuccessfulGenerationsStdDev</a></span>()</code> +<div class="block">Calculates the standard deviation of + the average number of generations in + each run where a perfect solution was found.</div> +</td> +</tr> +<tr id="i8" class="altColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getHighestFitness--">getHighestFitness</a></span>()</code> </td> +</tr> +<tr id="i9" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getLowestFitness--">getLowestFitness</a></span>()</code> </td> +</tr> +<tr id="i10" class="altColor"> +<td class="colFirst"><code>int</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getSuccessfulRuns--">getSuccessfulRuns</a></span>()</code> </td> +</tr> +<tr id="i11" class="rowColor"> +<td class="colFirst"><code>double</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#getSuccessRate--">getSuccessRate</a></span>()</code> +<div class="block">Calculates the ratio of successful runs (runs where + a perfect solution was found) to total number of runs.</div> +</td> +</tr> +<tr id="i12" class="altColor"> +<td class="colFirst"><code>void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/statistics/StatisticsLogger.html#logRun-int-double-int-boolean-">logRun</a></span>(int generation, + double fitness, + int active, + boolean successful)</code> +<div class="block">Log a new run.</div> +</td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.Object</h3> +<code>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="StatisticsLogger--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>StatisticsLogger</h4> +<pre>public StatisticsLogger()</pre> +<div class="block">Create a new statistics logger, use this when resetting is necessary.</div> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="logRun-int-double-int-boolean-"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>logRun</h4> +<pre>public void logRun(int generation, + double fitness, + int active, + boolean successful)</pre> +<div class="block">Log a new run. Calling any of the statistics getters will + now take this logged run into account as well as all previously + logged runs.</div> +<dl> +<dt><span class="paramLabel">Parameters:</span></dt> +<dd><code>generation</code> - the last generation when improvement occurred.</dd> +<dd><code>fitness</code> - the best fitness achieved in the run.</dd> +<dd><code>active</code> - the number of active nodes in the best chromosome found.</dd> +<dd><code>successful</code> - true if a perfect solution was found, false if otherwise.</dd> +</dl> +</li> +</ul> +<a name="getAverageFitness--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageFitness</h4> +<pre>public double getAverageFitness()</pre> +<div class="block">Averages the best fitness obtained in each run.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the average fitness.</dd> +</dl> +</li> +</ul> +<a name="getAverageFitnessStdDev--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageFitnessStdDev</h4> +<pre>public double getAverageFitnessStdDev()</pre> +<div class="block">Calculates the standard deviation of + the best fitness obtained in each run.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the standard deviation of average fitnesses.</dd> +</dl> +</li> +</ul> +<a name="getAverageActiveNodes--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageActiveNodes</h4> +<pre>public double getAverageActiveNodes()</pre> +<div class="block">Averages the number of active nodes in the + best chromosomes obtained across all runs.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the average number of active nodes.</dd> +</dl> +</li> +</ul> +<a name="getAverageActiveNodesStdDev--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageActiveNodesStdDev</h4> +<pre>public double getAverageActiveNodesStdDev()</pre> +<div class="block">Calculates the standard deviation of + the number of active nodes in the best solution + in each run.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the standard deviation of active node counts.</dd> +</dl> +</li> +</ul> +<a name="getAverageGenerations--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageGenerations</h4> +<pre>public double getAverageGenerations()</pre> +<div class="block">Calculates the average generation out of all runs. + The generation value in each run corresponds to the + last generation in which improvement happened. + <br><br> + Note that this method includes runs where no perfect + solution was found. For the average number of generations + for perfect solutions only, use <code>getAverageSuccessfulGenerations</code>.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the average number of generations.</dd> +</dl> +</li> +</ul> +<a name="getAverageGenerationsStdDev--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageGenerationsStdDev</h4> +<pre>public double getAverageGenerationsStdDev()</pre> +<div class="block">Calculates the standard deviation of + the average number of generations in + each run.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the standard deviation of the number of generations.</dd> +</dl> +</li> +</ul> +<a name="getHighestFitness--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getHighestFitness</h4> +<pre>public double getHighestFitness()</pre> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the highest fitness across all runs.</dd> +</dl> +</li> +</ul> +<a name="getLowestFitness--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getLowestFitness</h4> +<pre>public double getLowestFitness()</pre> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the lowest fitness across all runs.</dd> +</dl> +</li> +</ul> +<a name="getSuccessfulRuns--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getSuccessfulRuns</h4> +<pre>public int getSuccessfulRuns()</pre> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the number of runs in which a perfect solution was found.</dd> +</dl> +</li> +</ul> +<a name="getSuccessRate--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getSuccessRate</h4> +<pre>public double getSuccessRate()</pre> +<div class="block">Calculates the ratio of successful runs (runs where + a perfect solution was found) to total number of runs. + A double-precision value between 0 and 1 is returned, + where 0 means 0% success rate and 1 means 100% success rate.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the success rate across all runs.</dd> +</dl> +</li> +</ul> +<a name="getAverageSuccessfulGenerations--"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getAverageSuccessfulGenerations</h4> +<pre>public double getAverageSuccessfulGenerations()</pre> +<div class="block">Calculates the average generation out of successful runs only. + The generation value in each successful run corresponds to the + generation in which the perfect solution was found.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the average number of generations for perfect solutions.</dd> +</dl> +</li> +</ul> +<a name="getAverageSuccessfulGenerationsStdDev--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>getAverageSuccessfulGenerationsStdDev</h4> +<pre>public double getAverageSuccessfulGenerationsStdDev()</pre> +<div class="block">Calculates the standard deviation of + the average number of generations in + each run where a perfect solution was found.</div> +<dl> +<dt><span class="returnLabel">Returns:</span></dt> +<dd>the standard deviation of the number of generations in successful runs.</dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/StatisticsLogger.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../index-files/index-1.html">Index</a></li> +<li><a href="../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li><a href="../../../jcgp/backend/statistics/RunEntry.html" title="class in jcgp.backend.statistics"><span class="typeNameLink">Prev Class</span></a></li> +<li>Next Class</li> +</ul> +<ul class="navList"> +<li><a href="../../../index.html?jcgp/backend/statistics/StatisticsLogger.html" target="_top">Frames</a></li> +<li><a href="StatisticsLogger.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_bottom"> +<li><a href="../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_bottom"); 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