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-rw-r--r--doc/jcgp/backend/resources/Console.html286
-rw-r--r--doc/jcgp/backend/resources/ModifiableResources.html819
-rw-r--r--doc/jcgp/backend/resources/Resources.html804
-rw-r--r--doc/jcgp/backend/resources/class-use/Console.html214
-rw-r--r--doc/jcgp/backend/resources/class-use/ModifiableResources.html234
-rw-r--r--doc/jcgp/backend/resources/class-use/Resources.html350
-rw-r--r--doc/jcgp/backend/resources/package-frame.html25
-rw-r--r--doc/jcgp/backend/resources/package-summary.html167
-rw-r--r--doc/jcgp/backend/resources/package-tree.html145
-rw-r--r--doc/jcgp/backend/resources/package-use.html326
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diff --git a/doc/jcgp/backend/resources/Console.html b/doc/jcgp/backend/resources/Console.html
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-<hr>
-<br>
-<pre>public interface <span class="typeNameLabel">Console</span></pre>
-<div class="block">Defines the basic model for a console.
- <br><br>
- This interface will typically be implemented by a GUI class
- and GUI packages such as JavaFX are usually single-threaded.
- If the CGP experiment is running on a side thread (which would
- be the case so as not to block the entire GUI), updating a GUI
- element such as the console from a different thread would lead
- to concurrency problems. For this reason, this console is
- intended to buffer printed messages and only output them to the
- actual GUI control when <code>flush()</code> is called (which is
- guaranteed to be done in a thread-safe way by the library).</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
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diff --git a/doc/jcgp/backend/resources/ModifiableResources.html b/doc/jcgp/backend/resources/ModifiableResources.html
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-<h2 title="Class ModifiableResources" class="title">Class ModifiableResources</h2>
-</div>
-<div class="contentContainer">
-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">jcgp.backend.resources.Resources</a></li>
-<li>
-<ul class="inheritance">
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-<div class="block">This subclass of Resources allows modifications to be made.
- A read-only cast of this class is passed to modules for safety,
- and only classes with access to a JCGP instance may modify
- the resources.</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
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-<th class="colLast" scope="col">Method and Description</th>
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-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
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-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
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-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getInputsParameter--">getInputsParameter</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i6" class="altColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getLevelsBackParameter--">getLevelsBackParameter</a></span>()</code>&nbsp;</td>
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-</tr>
-<tr id="i8" class="altColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getPopulationSizeParameter--">getPopulationSizeParameter</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i9" class="rowColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getReportIntervalParameter--">getReportIntervalParameter</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i10" class="altColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getRowsParameter--">getRowsParameter</a></span>()</code>&nbsp;</td>
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-<tr id="i11" class="rowColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#getRunsParameter--">getRunsParameter</a></span>()</code>&nbsp;</td>
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-<td class="colFirst"><code><a href="../../../jcgp/backend/parameters/IntegerParameter.html" title="class in jcgp.backend.parameters">IntegerParameter</a></code></td>
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-</tr>
-<tr id="i13" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#incrementGeneration--">incrementGeneration</a></span>()</code>
-<div class="block">Adds 1 to the current generation.</div>
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-<tr id="i14" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#incrementRun--">incrementRun</a></span>()</code>
-<div class="block">Adds 1 to the current generation.</div>
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-<tr id="i15" class="rowColor">
-<td class="colFirst"><code>void</code></td>
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-<div class="block">This is called automatically by the experiment when the arity changes.</div>
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-<tr id="i16" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setColumns-int-">setColumns</a></span>(int&nbsp;columns)</code>&nbsp;</td>
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-<tr id="i17" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setConsole-jcgp.backend.resources.Console-">setConsole</a></span>(<a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>&nbsp;console)</code>
-<div class="block">This can be set to null if no extra console is desired.</div>
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-<tr id="i18" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setCurrentGeneration-int-">setCurrentGeneration</a></span>(int&nbsp;currentGeneration)</code>&nbsp;</td>
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-<tr id="i19" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setCurrentRun-int-">setCurrentRun</a></span>(int&nbsp;currentRun)</code>&nbsp;</td>
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-<tr id="i20" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setFitnessOrientation-jcgp.backend.modules.problem.BestFitness-">setFitnessOrientation</a></span>(<a href="../../../jcgp/backend/modules/problem/BestFitness.html" title="enum in jcgp.backend.modules.problem">BestFitness</a>&nbsp;newOrientation)</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setFunctionSet-jcgp.backend.function.FunctionSet-">setFunctionSet</a></span>(<a href="../../../jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function">FunctionSet</a>&nbsp;functionSet)</code>
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-<tr id="i22" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setGenerations-int-">setGenerations</a></span>(int&nbsp;generations)</code>&nbsp;</td>
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-<tr id="i23" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setInputs-int-">setInputs</a></span>(int&nbsp;inputs)</code>&nbsp;</td>
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-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setLevelsBack-int-">setLevelsBack</a></span>(int&nbsp;levelsBack)</code>&nbsp;</td>
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-<tr id="i25" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setOutputs-int-">setOutputs</a></span>(int&nbsp;outputs)</code>&nbsp;</td>
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-<tr id="i26" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setPopulationSize-int-">setPopulationSize</a></span>(int&nbsp;populationSize)</code>&nbsp;</td>
-</tr>
-<tr id="i27" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setReportInterval-int-">setReportInterval</a></span>(int&nbsp;report)</code>&nbsp;</td>
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-<tr id="i28" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setRows-int-">setRows</a></span>(int&nbsp;rows)</code>&nbsp;</td>
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-<tr id="i29" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setRuns-int-">setRuns</a></span>(int&nbsp;runs)</code>&nbsp;</td>
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-<tr id="i30" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/ModifiableResources.html#setSeed-long-">setSeed</a></span>(long&nbsp;seed)</code>&nbsp;</td>
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-<dd><code>currentGeneration</code> - the current generation to set.</dd>
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-<div class="block">Update the current function set.</div>
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-<div class="block">This can be set to null if no extra console is desired.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>console</code> - the extra console for the experiment to use.</dd>
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diff --git a/doc/jcgp/backend/resources/Resources.html b/doc/jcgp/backend/resources/Resources.html
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-<li><a href="../../../index-files/index-1.html">Index</a></li>
-<li><a href="../../../help-doc.html">Help</a></li>
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-<ul class="navList">
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-<h2 title="Class Resources" class="title">Class Resources</h2>
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-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
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-<hr>
-<br>
-<pre>public class <span class="typeNameLabel">Resources</span>
-extends java.lang.Object</pre>
-<div class="block">Encapsulates all of the resources based on which the program operates.
- Each instance of JCGP contains a single instance of <code>Resources</code>.
- <br><br>
- The experiment's <code>Resources</code> object is passed to modules as the program operates, and
- the actual parameter values can be obtained using getter methods. Note that, for code brevity,
- this class's getters do not start with the word "get". For instance, to get the number of rows,
- one would use <code>rows()</code> instead of <code>getRows()</code> which doesn't exist.
- The fitness orientation of the problem being solved can also be retrieved using <code>fitnessOrientation()</code>.
- Evolutionary strategies will typically use this to perform selection.
- <br><br>
- In addition to parameters, this class also offers utility methods. Any necessary random numbers
- should be obtained using <code>getRandomInt()</code> and <code>getRandomDouble()</code> as these methods
- use a particular <code>Random</code> object guaranteed to generate random numbers based on the seed
- parameter. Functions from the selected function set can be obtained through this class as well.
- Finally, printing to the console should be done via the resources using the report and print
- methods, so that these prints also get sent to the GUI console (if one is present).</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
-<dd>Eduardo Pedroni</dd>
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-<dd><a href="../../../jcgp/backend/parameters/Parameter.html" title="class in jcgp.backend.parameters"><code>Parameter</code></a></dd>
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-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#generations--">generations</a></span>()</code>&nbsp;</td>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getFunction-int-">getFunction</a></span>(int&nbsp;index)</code>
-<div class="block">Gets the indexed function out of the
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-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getFunctionIndex-jcgp.backend.function.Function-">getFunctionIndex</a></span>(<a href="../../../jcgp/backend/function/Function.html" title="class in jcgp.backend.function">Function</a>&nbsp;function)</code>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getRandomDouble--">getRandomDouble</a></span>()</code>
-<div class="block">Gets the next random integer using the experiment's random
- number generator.</div>
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-</tr>
-<tr id="i10" class="altColor">
-<td class="colFirst"><code>double</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getRandomDouble-int-">getRandomDouble</a></span>(int&nbsp;limit)</code>
-<div class="block">Gets the next random double using the experiment's random
- number generator.</div>
-</td>
-</tr>
-<tr id="i11" class="rowColor">
-<td class="colFirst"><code><a href="../../../jcgp/backend/function/Function.html" title="class in jcgp.backend.function">Function</a></code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getRandomFunction--">getRandomFunction</a></span>()</code>
-<div class="block">Gets a random allowed function from the problem function set.</div>
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-</tr>
-<tr id="i12" class="altColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#getRandomInt-int-">getRandomInt</a></span>(int&nbsp;limit)</code>
-<div class="block">Gets the next random integer using the experiment's random
- number generator.</div>
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-</tr>
-<tr id="i13" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#inputs--">inputs</a></span>()</code>&nbsp;</td>
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-<td class="colFirst"><code>int</code></td>
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-<tr id="i15" class="rowColor">
-<td class="colFirst"><code>int</code></td>
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-</tr>
-<tr id="i16" class="altColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#outputs--">outputs</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i17" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#populationSize--">populationSize</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i18" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#print-java.lang.String-">print</a></span>(java.lang.String&nbsp;message)</code>
-<div class="block">Prints a message to the consoles ignoring
- report interval.</div>
-</td>
-</tr>
-<tr id="i19" class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#println-java.lang.String-">println</a></span>(java.lang.String&nbsp;message)</code>
-<div class="block">Prints a message to the consoles ignoring
- report interval.</div>
-</td>
-</tr>
-<tr id="i20" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#report-java.lang.String-">report</a></span>(java.lang.String&nbsp;message)</code>
-<div class="block">Prints a message to the consoles taking into account the
- report interval parameter.</div>
-</td>
-</tr>
-<tr id="i21" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#reportInterval--">reportInterval</a></span>()</code>&nbsp;</td>
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-<div class="block">Prints a message to the consoles taking into account the
- report interval parameter.</div>
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-</tr>
-<tr id="i23" class="rowColor">
-<td class="colFirst"><code>int</code></td>
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-</tr>
-<tr id="i24" class="altColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#runs--">runs</a></span>()</code>&nbsp;</td>
-</tr>
-<tr id="i25" class="rowColor">
-<td class="colFirst"><code>int</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../jcgp/backend/resources/Resources.html#seed--">seed</a></span>()</code>&nbsp;</td>
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-<div class="block">Returns the index of a specified function. If the function is not found,
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-<dd><code>function</code> - the function with unknown index.</dd>
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diff --git a/doc/jcgp/backend/resources/class-use/Console.html b/doc/jcgp/backend/resources/class-use/Console.html
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-<h2 title="Uses of Interface jcgp.backend.resources.Console" class="title">Uses of Interface<br>jcgp.backend.resources.Console</h2>
-</div>
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-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
-<caption><span>Packages that use <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Package</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp">jcgp</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="#jcgp.backend.resources">jcgp.backend.resources</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.gui.console">jcgp.gui.console</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList">
-<ul class="blockList">
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-</a>
-<h3>Uses of <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a> in <a href="../../../../jcgp/package-summary.html">jcgp</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/package-summary.html">jcgp</a> with parameters of type <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../jcgp/JCGP.html#setConsole-jcgp.backend.resources.Console-">setConsole</a></span>(<a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>&nbsp;console)</code>
-<div class="block">Sets an extra console.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList"><a name="jcgp.backend.resources">
-<!-- -->
-</a>
-<h3>Uses of <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a> in <a href="../../../../jcgp/backend/resources/package-summary.html">jcgp.backend.resources</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/backend/resources/package-summary.html">jcgp.backend.resources</a> with parameters of type <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span class="typeNameLabel">ModifiableResources.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/resources/ModifiableResources.html#setConsole-jcgp.backend.resources.Console-">setConsole</a></span>(<a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a>&nbsp;console)</code>
-<div class="block">This can be set to null if no extra console is desired.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList"><a name="jcgp.gui.console">
-<!-- -->
-</a>
-<h3>Uses of <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a> in <a href="../../../../jcgp/gui/console/package-summary.html">jcgp.gui.console</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing classes, and an explanation">
-<caption><span>Classes in <a href="../../../../jcgp/gui/console/package-summary.html">jcgp.gui.console</a> that implement <a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Class and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/gui/console/ConsolePane.html" title="class in jcgp.gui.console">ConsolePane</a></span></code>
-<div class="block">Console pane used by the GUI to display CGP output messages.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-</ul>
-</li>
-</ul>
-</div>
-<!-- ======= START OF BOTTOM NAVBAR ====== -->
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-<li><a href="../../../../overview-summary.html">Overview</a></li>
-<li><a href="../package-summary.html">Package</a></li>
-<li><a href="../../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Class</a></li>
-<li class="navBarCell1Rev">Use</li>
-<li><a href="../package-tree.html">Tree</a></li>
-<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../../index-files/index-1.html">Index</a></li>
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diff --git a/doc/jcgp/backend/resources/class-use/ModifiableResources.html b/doc/jcgp/backend/resources/class-use/ModifiableResources.html
deleted file mode 100644
index d10eb29..0000000
--- a/doc/jcgp/backend/resources/class-use/ModifiableResources.html
+++ /dev/null
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-<!-- NewPage -->
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-<title>Uses of Class jcgp.backend.resources.ModifiableResources</title>
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-<td class="colFirst"><a href="#jcgp">jcgp</a></td>
-<td class="colLast">&nbsp;</td>
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-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/package-summary.html">jcgp</a> that return <a href="../../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
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-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code><a href="../../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></code></td>
-<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../jcgp/JCGP.html#getResources--">getResources</a></span>()</code>
-<div class="block">Returns a reference to the <code>ModifiableResources</code> used by the
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-<tr class="altColor">
-<td class="colFirst"><code>void</code></td>
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-<tr class="rowColor">
-<td class="colFirst"><code>static void</code></td>
-<td class="colLast"><span class="typeNameLabel">TestCaseParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/TestCaseParser.html#parse-java.io.File-jcgp.backend.modules.problem.TestCaseProblem-jcgp.backend.resources.ModifiableResources-">parse</a></span>(java.io.File&nbsp;file,
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-<div class="block">Sets the number of inputs and outputs in the resources
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diff --git a/doc/jcgp/backend/resources/class-use/Resources.html b/doc/jcgp/backend/resources/class-use/Resources.html
deleted file mode 100644
index 7e05842..0000000
--- a/doc/jcgp/backend/resources/class-use/Resources.html
+++ /dev/null
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-<tr>
-<th class="colFirst" scope="col">Package</th>
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-<tbody>
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-<td class="colFirst"><a href="#jcgp.backend.modules.es">jcgp.backend.modules.es</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="#jcgp.backend.modules.mutator">jcgp.backend.modules.mutator</a></td>
-<td class="colLast">&nbsp;</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><a href="#jcgp.backend.modules.problem">jcgp.backend.modules.problem</a></td>
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-<tr>
-<th class="colOne" scope="col">Constructor and Description</th>
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-<tbody>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/MuPlusLambda.html#MuPlusLambda-jcgp.backend.resources.Resources-">MuPlusLambda</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/TournamentSelection.html#TournamentSelection-jcgp.backend.resources.Resources-">TournamentSelection</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
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-<tr>
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-<tbody>
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-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/problem/DigitalCircuitProblem.html#DigitalCircuitProblem-jcgp.backend.resources.Resources-">DigitalCircuitProblem</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
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- <a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
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-<td class="colLast"><span class="typeNameLabel">FunctionParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/FunctionParser.html#parse-java.io.File-jcgp.backend.function.FunctionSet-jcgp.backend.resources.Resources-">parse</a></span>(java.io.File&nbsp;file,
- <a href="../../../../jcgp/backend/function/FunctionSet.html" title="class in jcgp.backend.function">FunctionSet</a>&nbsp;functionSet,
- <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Reads the specified file and attempts to enable
- and disable the functions in the FunctionSet
- accordingly.</div>
-</td>
-</tr>
-<tr class="altColor">
-<td class="colFirst"><code>static void</code></td>
-<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#print-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">print</a></span>(<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Writes a chromosome to the console in .chr format.</div>
-</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><code>static void</code></td>
-<td class="colLast"><span class="typeNameLabel">ChromosomeParser.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/parsers/ChromosomeParser.html#save-java.io.File-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">save</a></span>(java.io.File&nbsp;file,
- <a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;chromosome,
- <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Writes a chromosome into the specified .chr file.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList"><a name="jcgp.backend.population">
-<!-- -->
-</a>
-<h3>Uses of <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
-<caption><span>Methods in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a> that return <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code><a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a></code></td>
-<td class="colLast"><span class="typeNameLabel">Chromosome.</span><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Chromosome.html#getResources--">getResources</a></span>()</code>&nbsp;</td>
-</tr>
-</tbody>
-</table>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing constructors, and an explanation">
-<caption><span>Constructors in <a href="../../../../jcgp/backend/population/package-summary.html">jcgp.backend.population</a> with parameters of type <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colOne" scope="col">Constructor and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Chromosome.html#Chromosome-jcgp.backend.resources.Resources-">Chromosome</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Initialise a chromosome with the specified parameters.</div>
-</td>
-</tr>
-<tr class="rowColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Population.html#Population-jcgp.backend.population.Chromosome-jcgp.backend.resources.Resources-">Population</a></span>(<a href="../../../../jcgp/backend/population/Chromosome.html" title="class in jcgp.backend.population">Chromosome</a>&nbsp;parent,
- <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Initialise a population of copies of the given chromosome.</div>
-</td>
-</tr>
-<tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/population/Population.html#Population-jcgp.backend.resources.Resources-">Population</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Initialise a random population according to the parameters specified
- in the resources.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList"><a name="jcgp.backend.resources">
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-</a>
-<h3>Uses of <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> in <a href="../../../../jcgp/backend/resources/package-summary.html">jcgp.backend.resources</a></h3>
-<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing subclasses, and an explanation">
-<caption><span>Subclasses of <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a> in <a href="../../../../jcgp/backend/resources/package-summary.html">jcgp.backend.resources</a></span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Class and Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></span></code>
-<div class="block">This subclass of Resources allows modifications to be made.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-</ul>
-</li>
-</ul>
-</div>
-<!-- ======= START OF BOTTOM NAVBAR ====== -->
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-<!-- -->
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-<li><a href="../package-summary.html">Package</a></li>
-<li><a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Class</a></li>
-<li class="navBarCell1Rev">Use</li>
-<li><a href="../package-tree.html">Tree</a></li>
-<li><a href="../../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../../index-files/index-1.html">Index</a></li>
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-</ul>
-</div>
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-<li>Prev</li>
-<li>Next</li>
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-<li><a href="Resources.html" target="_top">No&nbsp;Frames</a></li>
-</ul>
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- allClassesLink = document.getElementById("allclasses_navbar_bottom");
- if(window==top) {
- allClassesLink.style.display = "block";
- }
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- }
- //-->
-</script>
-</div>
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-<!-- ======== END OF BOTTOM NAVBAR ======= -->
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diff --git a/doc/jcgp/backend/resources/package-frame.html b/doc/jcgp/backend/resources/package-frame.html
deleted file mode 100644
index 594965c..0000000
--- a/doc/jcgp/backend/resources/package-frame.html
+++ /dev/null
@@ -1,25 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>jcgp.backend.resources</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../script.js"></script>
-</head>
-<body>
-<h1 class="bar"><a href="../../../jcgp/backend/resources/package-summary.html" target="classFrame">jcgp.backend.resources</a></h1>
-<div class="indexContainer">
-<h2 title="Interfaces">Interfaces</h2>
-<ul title="Interfaces">
-<li><a href="Console.html" title="interface in jcgp.backend.resources" target="classFrame"><span class="interfaceName">Console</span></a></li>
-</ul>
-<h2 title="Classes">Classes</h2>
-<ul title="Classes">
-<li><a href="ModifiableResources.html" title="class in jcgp.backend.resources" target="classFrame">ModifiableResources</a></li>
-<li><a href="Resources.html" title="class in jcgp.backend.resources" target="classFrame">Resources</a></li>
-</ul>
-</div>
-</body>
-</html>
diff --git a/doc/jcgp/backend/resources/package-summary.html b/doc/jcgp/backend/resources/package-summary.html
deleted file mode 100644
index ae5e7b3..0000000
--- a/doc/jcgp/backend/resources/package-summary.html
+++ /dev/null
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-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>jcgp.backend.resources</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../script.js"></script>
-</head>
-<body>
-<script type="text/javascript"><!--
- try {
- if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="jcgp.backend.resources";
- }
- }
- catch(err) {
- }
-//-->
-</script>
-<noscript>
-<div>JavaScript is disabled on your browser.</div>
-</noscript>
-<!-- ========= START OF TOP NAVBAR ======= -->
-<div class="topNav"><a name="navbar.top">
-<!-- -->
-</a>
-<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
-<a name="navbar.top.firstrow">
-<!-- -->
-</a>
-<ul class="navList" title="Navigation">
-<li><a href="../../../overview-summary.html">Overview</a></li>
-<li class="navBarCell1Rev">Package</li>
-<li>Class</li>
-<li><a href="package-use.html">Use</a></li>
-<li><a href="package-tree.html">Tree</a></li>
-<li><a href="../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../index-files/index-1.html">Index</a></li>
-<li><a href="../../../help-doc.html">Help</a></li>
-</ul>
-</div>
-<div class="subNav">
-<ul class="navList">
-<li><a href="../../../jcgp/backend/population/package-summary.html">Prev&nbsp;Package</a></li>
-<li><a href="../../../jcgp/backend/statistics/package-summary.html">Next&nbsp;Package</a></li>
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-<ul class="navList" id="allclasses_navbar_top">
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-<div>
-<script type="text/javascript"><!--
- allClassesLink = document.getElementById("allclasses_navbar_top");
- if(window==top) {
- allClassesLink.style.display = "block";
- }
- else {
- allClassesLink.style.display = "none";
- }
- //-->
-</script>
-</div>
-<a name="skip.navbar.top">
-<!-- -->
-</a></div>
-<!-- ========= END OF TOP NAVBAR ========= -->
-<div class="header">
-<h1 title="Package" class="title">Package&nbsp;jcgp.backend.resources</h1>
-</div>
-<div class="contentContainer">
-<ul class="blockList">
-<li class="blockList">
-<table class="typeSummary" border="0" cellpadding="3" cellspacing="0" summary="Interface Summary table, listing interfaces, and an explanation">
-<caption><span>Interface Summary</span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Interface</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources">Console</a></td>
-<td class="colLast">
-<div class="block">Defines the basic model for a console.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-<li class="blockList">
-<table class="typeSummary" border="0" cellpadding="3" cellspacing="0" summary="Class Summary table, listing classes, and an explanation">
-<caption><span>Class Summary</span><span class="tabEnd">&nbsp;</span></caption>
-<tr>
-<th class="colFirst" scope="col">Class</th>
-<th class="colLast" scope="col">Description</th>
-</tr>
-<tbody>
-<tr class="altColor">
-<td class="colFirst"><a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources">ModifiableResources</a></td>
-<td class="colLast">
-<div class="block">This subclass of Resources allows modifications to be made.</div>
-</td>
-</tr>
-<tr class="rowColor">
-<td class="colFirst"><a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a></td>
-<td class="colLast">
-<div class="block">Encapsulates all of the resources based on which the program operates.</div>
-</td>
-</tr>
-</tbody>
-</table>
-</li>
-</ul>
-</div>
-<!-- ======= START OF BOTTOM NAVBAR ====== -->
-<div class="bottomNav"><a name="navbar.bottom">
-<!-- -->
-</a>
-<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
-<a name="navbar.bottom.firstrow">
-<!-- -->
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-<ul class="navList" title="Navigation">
-<li><a href="../../../overview-summary.html">Overview</a></li>
-<li class="navBarCell1Rev">Package</li>
-<li>Class</li>
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-<li><a href="package-tree.html">Tree</a></li>
-<li><a href="../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../index-files/index-1.html">Index</a></li>
-<li><a href="../../../help-doc.html">Help</a></li>
-</ul>
-</div>
-<div class="subNav">
-<ul class="navList">
-<li><a href="../../../jcgp/backend/population/package-summary.html">Prev&nbsp;Package</a></li>
-<li><a href="../../../jcgp/backend/statistics/package-summary.html">Next&nbsp;Package</a></li>
-</ul>
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-</ul>
-<ul class="navList" id="allclasses_navbar_bottom">
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-<div>
-<script type="text/javascript"><!--
- allClassesLink = document.getElementById("allclasses_navbar_bottom");
- if(window==top) {
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- //-->
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-<!-- -->
-</a></div>
-<!-- ======== END OF BOTTOM NAVBAR ======= -->
-</body>
-</html>
diff --git a/doc/jcgp/backend/resources/package-tree.html b/doc/jcgp/backend/resources/package-tree.html
deleted file mode 100644
index c7980ba..0000000
--- a/doc/jcgp/backend/resources/package-tree.html
+++ /dev/null
@@ -1,145 +0,0 @@
-<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>jcgp.backend.resources Class Hierarchy</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../script.js"></script>
-</head>
-<body>
-<script type="text/javascript"><!--
- try {
- if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="jcgp.backend.resources Class Hierarchy";
- }
- }
- catch(err) {
- }
-//-->
-</script>
-<noscript>
-<div>JavaScript is disabled on your browser.</div>
-</noscript>
-<!-- ========= START OF TOP NAVBAR ======= -->
-<div class="topNav"><a name="navbar.top">
-<!-- -->
-</a>
-<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
-<a name="navbar.top.firstrow">
-<!-- -->
-</a>
-<ul class="navList" title="Navigation">
-<li><a href="../../../overview-summary.html">Overview</a></li>
-<li><a href="package-summary.html">Package</a></li>
-<li>Class</li>
-<li>Use</li>
-<li class="navBarCell1Rev">Tree</li>
-<li><a href="../../../deprecated-list.html">Deprecated</a></li>
-<li><a href="../../../index-files/index-1.html">Index</a></li>
-<li><a href="../../../help-doc.html">Help</a></li>
-</ul>
-</div>
-<div class="subNav">
-<ul class="navList">
-<li><a href="../../../jcgp/backend/population/package-tree.html">Prev</a></li>
-<li><a href="../../../jcgp/backend/statistics/package-tree.html">Next</a></li>
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-<!-- -->
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-<!-- ========= END OF TOP NAVBAR ========= -->
-<div class="header">
-<h1 class="title">Hierarchy For Package jcgp.backend.resources</h1>
-<span class="packageHierarchyLabel">Package Hierarchies:</span>
-<ul class="horizontal">
-<li><a href="../../../overview-tree.html">All Packages</a></li>
-</ul>
-</div>
-<div class="contentContainer">
-<h2 title="Class Hierarchy">Class Hierarchy</h2>
-<ul>
-<li type="circle">java.lang.Object
-<ul>
-<li type="circle">jcgp.backend.resources.<a href="../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources"><span class="typeNameLink">Resources</span></a>
-<ul>
-<li type="circle">jcgp.backend.resources.<a href="../../../jcgp/backend/resources/ModifiableResources.html" title="class in jcgp.backend.resources"><span class="typeNameLink">ModifiableResources</span></a></li>
-</ul>
-</li>
-</ul>
-</li>
-</ul>
-<h2 title="Interface Hierarchy">Interface Hierarchy</h2>
-<ul>
-<li type="circle">jcgp.backend.resources.<a href="../../../jcgp/backend/resources/Console.html" title="interface in jcgp.backend.resources"><span class="typeNameLink">Console</span></a></li>
-</ul>
-</div>
-<!-- ======= START OF BOTTOM NAVBAR ====== -->
-<div class="bottomNav"><a name="navbar.bottom">
-<!-- -->
-</a>
-<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
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-<ul class="navList" title="Navigation">
-<li><a href="../../../overview-summary.html">Overview</a></li>
-<li><a href="package-summary.html">Package</a></li>
-<li>Class</li>
-<li>Use</li>
-<li class="navBarCell1Rev">Tree</li>
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-<li><a href="../../../index-files/index-1.html">Index</a></li>
-<li><a href="../../../help-doc.html">Help</a></li>
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-<li><a href="../../../jcgp/backend/statistics/package-tree.html">Next</a></li>
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diff --git a/doc/jcgp/backend/resources/package-use.html b/doc/jcgp/backend/resources/package-use.html
deleted file mode 100644
index 9483b01..0000000
--- a/doc/jcgp/backend/resources/package-use.html
+++ /dev/null
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-<!-- NewPage -->
-<html lang="en">
-<head>
-<!-- Generated by javadoc (1.8.0_05) on Thu May 22 06:02:33 BST 2014 -->
-<title>Uses of Package jcgp.backend.resources</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../script.js"></script>
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- parent.document.title="Uses of Package jcgp.backend.resources";
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-<th class="colOne" scope="col">Class and Description</th>
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