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-rw-r--r--doc/jcgp/backend/modules/es/EvolutionaryStrategy.html290
-rw-r--r--doc/jcgp/backend/modules/es/MuPlusLambda.html330
-rw-r--r--doc/jcgp/backend/modules/es/TournamentSelection.html333
-rw-r--r--doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html204
-rw-r--r--doc/jcgp/backend/modules/es/class-use/MuPlusLambda.html124
-rw-r--r--doc/jcgp/backend/modules/es/class-use/TournamentSelection.html124
-rw-r--r--doc/jcgp/backend/modules/es/package-frame.html22
-rw-r--r--doc/jcgp/backend/modules/es/package-summary.html162
-rw-r--r--doc/jcgp/backend/modules/es/package-tree.html146
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-<div class="subTitle">jcgp.backend.modules.es</div>
-<h2 title="Class EvolutionaryStrategy" class="title">Class EvolutionaryStrategy</h2>
-</div>
-<div class="contentContainer">
-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules">jcgp.backend.modules.Module</a></li>
-<li>
-<ul class="inheritance">
-<li>jcgp.backend.modules.es.EvolutionaryStrategy</li>
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-<dt>Direct Known Subclasses:</dt>
-<dd><a href="../../../../jcgp/backend/modules/es/MuPlusLambda.html" title="class in jcgp.backend.modules.es">MuPlusLambda</a>, <a href="../../../../jcgp/backend/modules/es/TournamentSelection.html" title="class in jcgp.backend.modules.es">TournamentSelection</a></dd>
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-<hr>
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-<pre>public abstract class <span class="typeNameLabel">EvolutionaryStrategy</span>
-extends <a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules">Module</a></pre>
-<div class="block">This class specifies the characteristics of an evolutionary strategy. The evolutionary
- strategy's job is to generate the next population of solutions. In JCGP this is done by modifying
- the provided population object rather than creating a new one.
- <br><br>
- A typical implementation of EvolutionaryStratey iterates through the chromosomes
- in the population and selects the individual(s) to be promoted. It then uses
- <code>mutator.mutate()</code> to generically mutate the promoted individual(s). Parameter-dependent
- strategies can be implemented by accessing the parameters via the resources
- argument.
- <br><br>
- Parameters may be specified to control the implemented strategy. Any parameters
- registered with <code>registerParameters()</code> should be displayed by the user interface,
- if it is being used. See <a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules"><code>Module</code></a> for more information.
- <br><br>
- It is advisable to use <code>Resources.reportln()</code> and <code>Resources.report()</code>
- to print any relevant information. Note that reportln() and report() are affected
- by the report interval base parameter. Use <code>Resources.println()</code> and
- <code>Resources.print()</code> to print information regardless of the current generation.
- See <a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources"><code>Resources</code></a> for more information.</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
-<dd>Eduardo Pedroni</dd>
-<dt><span class="seeLabel">See Also:</span></dt>
-<dd><a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules"><code>Module</code></a></dd>
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-<tr id="i0" class="altColor">
-<td class="colFirst"><code>abstract void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">evolve</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population,
- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</code>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
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- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</pre>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>population</code> - the population to evolve.</dd>
-<dd><code>mutator</code> - the mutator with which to mutate the promoted individuals.</dd>
-</dl>
-</li>
-</ul>
-</li>
-</ul>
-</li>
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diff --git a/doc/jcgp/backend/modules/es/MuPlusLambda.html b/doc/jcgp/backend/modules/es/MuPlusLambda.html
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-<title>MuPlusLambda</title>
-<meta name="date" content="2014-05-22">
-<link rel="stylesheet" type="text/css" href="../../../../stylesheet.css" title="Style">
-<script type="text/javascript" src="../../../../script.js"></script>
-</head>
-<body>
-<script type="text/javascript"><!--
- try {
- if (location.href.indexOf('is-external=true') == -1) {
- parent.document.title="MuPlusLambda";
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-<div class="header">
-<div class="subTitle">jcgp.backend.modules.es</div>
-<h2 title="Class MuPlusLambda" class="title">Class MuPlusLambda</h2>
-</div>
-<div class="contentContainer">
-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules">jcgp.backend.modules.Module</a></li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">jcgp.backend.modules.es.EvolutionaryStrategy</a></li>
-<li>
-<ul class="inheritance">
-<li>jcgp.backend.modules.es.MuPlusLambda</li>
-</ul>
-</li>
-</ul>
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-<pre>public class <span class="typeNameLabel">MuPlusLambda</span>
-extends <a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></pre>
-<div class="block">(μ + λ)-ES
- <br><br>
- This strategy selects the μ fittest chromosomes from the population.
- The promoted individuals are copied into the new population and mutated
- λ times, but also carried forward unchanged. The total population size
- is μ + λ.
- <br><br>
- Two integer parameters are used to control this strategy: parents
- and offspring. They are constrained in that they must always add up to
- the population size, and must never be smaller than 1.
- <br>
- One additional parameter, report, controls whether a detailed log of the
- algorithm's operation is to be printed or not. Reports respect the report
- interval base parameter.</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
-<dd>Eduardo Pedroni</dd>
-<dt><span class="seeLabel">See Also:</span></dt>
-<dd><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es"><code>EvolutionaryStrategy</code></a></dd>
-</dl>
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-<th class="colOne" scope="col">Constructor and Description</th>
-</tr>
-<tr class="altColor">
-<td class="colOne"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/MuPlusLambda.html#MuPlusLambda-jcgp.backend.resources.Resources-">MuPlusLambda</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
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- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</code>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
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- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">EvolutionaryStrategy</a></code></span></div>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">evolve</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></code></dd>
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-</dl>
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diff --git a/doc/jcgp/backend/modules/es/TournamentSelection.html b/doc/jcgp/backend/modules/es/TournamentSelection.html
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-<title>TournamentSelection</title>
-<meta name="date" content="2014-05-22">
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-<div class="header">
-<div class="subTitle">jcgp.backend.modules.es</div>
-<h2 title="Class TournamentSelection" class="title">Class TournamentSelection</h2>
-</div>
-<div class="contentContainer">
-<ul class="inheritance">
-<li>java.lang.Object</li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../../jcgp/backend/modules/Module.html" title="class in jcgp.backend.modules">jcgp.backend.modules.Module</a></li>
-<li>
-<ul class="inheritance">
-<li><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">jcgp.backend.modules.es.EvolutionaryStrategy</a></li>
-<li>
-<ul class="inheritance">
-<li>jcgp.backend.modules.es.TournamentSelection</li>
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-<pre>public class <span class="typeNameLabel">TournamentSelection</span>
-extends <a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></pre>
-<div class="block">Tournament selection
- <br><br>
- This strategy generates a new population by selecting a specified number
- of chromosomes from the original population and selecting the fittest out
- of the isolated subset (the tournament). The selected individual is mutated
- using the specified mutator. This process is repeated until the new population
- is complete.
- <br><br>
- One integer parameter is used to control this strategy: tournament
- size. This must always be greater than 0 and smaller than or equal to the
- population size. Setting it to equal population size results in the same
- chromosome being selected for every tournament, and setting it to 1 leads
- to an effectively random search.
- <br>
- One additional parameter, report, controls whether a detailed log of the
- algorithm's operation is to be printed or not. Reports respect the report
- interval base parameter.</div>
-<dl>
-<dt><span class="simpleTagLabel">Author:</span></dt>
-<dd>Eduardo Pedroni</dd>
-<dt><span class="seeLabel">See Also:</span></dt>
-<dd><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es"><code>EvolutionaryStrategy</code></a></dd>
-</dl>
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-</tr>
-<tr class="altColor">
-<td class="colOne"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/TournamentSelection.html#TournamentSelection-jcgp.backend.resources.Resources-">TournamentSelection</a></span>(<a href="../../../../jcgp/backend/resources/Resources.html" title="class in jcgp.backend.resources">Resources</a>&nbsp;resources)</code>
-<div class="block">Creates a new instance of TournamentSelection.</div>
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-<tr id="i0" class="altColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><code><span class="memberNameLink"><a href="../../../../jcgp/backend/modules/es/TournamentSelection.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">evolve</a></span>(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population,
- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</code>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
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-</table>
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-<code><a href="../../../../jcgp/backend/modules/Module.html#getLocalParameters--">getLocalParameters</a>, <a href="../../../../jcgp/backend/modules/Module.html#toString--">toString</a></code></li>
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-<div class="block">Creates a new instance of TournamentSelection.</div>
-<dl>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>resources</code> - a reference to the experiment's resources.</dd>
-</dl>
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-<pre>public&nbsp;void&nbsp;evolve(<a href="../../../../jcgp/backend/population/Population.html" title="class in jcgp.backend.population">Population</a>&nbsp;population,
- <a href="../../../../jcgp/backend/modules/mutator/Mutator.html" title="class in jcgp.backend.modules.mutator">Mutator</a>&nbsp;mutator)</pre>
-<div class="block"><span class="descfrmTypeLabel">Description copied from class:&nbsp;<code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">EvolutionaryStrategy</a></code></span></div>
-<div class="block">Performs the selection algorithm and uses the mutator to create
- the next generation of solutions.</div>
-<dl>
-<dt><span class="overrideSpecifyLabel">Specified by:</span></dt>
-<dd><code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html#evolve-jcgp.backend.population.Population-jcgp.backend.modules.mutator.Mutator-">evolve</a></code>&nbsp;in class&nbsp;<code><a href="../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a></code></dd>
-<dt><span class="paramLabel">Parameters:</span></dt>
-<dd><code>population</code> - the population to evolve.</dd>
-<dd><code>mutator</code> - the mutator with which to mutate the promoted individuals.</dd>
-</dl>
-</li>
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diff --git a/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html b/doc/jcgp/backend/modules/es/class-use/EvolutionaryStrategy.html
deleted file mode 100644
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-<th class="colFirst" scope="col">Modifier and Type</th>
-<th class="colLast" scope="col">Method and Description</th>
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-<td class="colFirst"><code><a href="../../../../../jcgp/backend/modules/es/EvolutionaryStrategy.html" title="class in jcgp.backend.modules.es">EvolutionaryStrategy</a>[]</code></td>
-<td class="colLast"><span class="typeNameLabel">JCGP.</span><code><span class="memberNameLink"><a href="../../../../../jcgp/JCGP.html#getEvolutionaryStrategies--">getEvolutionaryStrategies</a></span>()</code>&nbsp;</td>
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-<td class="colFirst"><code>class&nbsp;</code></td>
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- This strategy selects the μ fittest chromosomes from the population.</div>
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-<tr class="rowColor">
-<td class="colFirst"><code>class&nbsp;</code></td>
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-<div class="block">Tournament selection
- <br><br>
- This strategy generates a new population by selecting a specified number
- of chromosomes from the original population and selecting the fittest out
- of the isolated subset (the tournament).</div>
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-</td>
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-<tr class="rowColor">
-<td class="colFirst"><a href="../../../../jcgp/backend/modules/es/MuPlusLambda.html" title="class in jcgp.backend.modules.es">MuPlusLambda</a></td>
-<td class="colLast">
-<div class="block">(μ + λ)-ES
- <br><br>
- This strategy selects the μ fittest chromosomes from the population.</div>
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-<td class="colFirst"><a href="../../../../jcgp/backend/modules/es/TournamentSelection.html" title="class in jcgp.backend.modules.es">TournamentSelection</a></td>
-<td class="colLast">
-<div class="block">Tournament selection
- <br><br>
- This strategy generates a new population by selecting a specified number
- of chromosomes from the original population and selecting the fittest out
- of the isolated subset (the tournament).</div>
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